Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq739 82.4 7e-11 >seq739 Length=1399493 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | |||||||||||||| || || ||||| | || || || ||| Sbjct 8179 AAATGGAGTGTGGACTCTTTCTGGATGTTATAATCTGAAAGAGTTCTTCCATCTTCTAGC 8120 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || ||||| || | || | ||||||||||| ||||| || || || ||||| ||| Sbjct 8119 TGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCCTCTTTGTC-CTGAAT 8061 Query 133575 TTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| | ||| | | ||| | ||||| | | || || || | ||||| |||||| || Sbjct 8060 TTTAGCCTTAACATTCTCTATTGTGTCAGATGCTTCAACTTCCAAGGTGATGGTTTTTCC 8001 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || |||||||| || |||||||| Sbjct 8000 AGTAAGTGTTTTTACAAAGATCTGCAT 7974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483387208297160