Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq911 82.4 8e-11 >seq911 Length=74078 Score = 82.4 bits (90), Expect = 8e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 142240 ATCTTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAG 142299 || || |||||||| ||||| || ||| || ||||||||||| || || |||| || Sbjct 47398 ATTTTTGGTCATCAAATGCGCTTTAATTTGCAGCAAGGCTTTCCGCTCGTCACCACAAAA 47339 Query 142300 AAGCTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAAC 142359 || ||||| || || || ||| | || ||||| | |||||||| || || Sbjct 47338 AAATGTCATCTACGTTCTATTATTCATGAATTACTTTGGTTTTTAAAAGGCGAAACCAAT 47279 Query 142360 ATCAAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGC 142419 || ||||| || || | || |||| ||||||||||| ||||| ||| || || Sbjct 47278 ATTGCTTATCTACATGACAATAATGTCACTATCTGGGATGAGTGGGCCGATAAAAACGGT 47219 Query 142420 AACCTCGGACCTGTCTACGGCAAGCAGTGG 142449 | || ||||| || || || || || ||| Sbjct 47218 GATCTAGGACCCGTTTATGGTAAACAATGG 47189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500464421561840