Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_026607.2 Length=159914 Score E Sequences producing significant alignments: (Bits) Value seq2372 149 6e-31 seq916 109 6e-19 >seq2372 Length=84335 Score = 149 bits (164), Expect = 6e-31 Identities = 308/455 (68%), Gaps = 4/455 (1%) Strand=Plus/Plus Query 133252 CATCAAATCATTGATTTGCAGACCATAGTCTAGATGACGAATACGGTTTTCATCTACGCC 133311 ||| || | ||| ||||| | ||||| |||| ||| || | || ||||| || | || Sbjct 73691 CATTAATTTATTAATTTGTACCCCATAATCTAAATGGCGCACGCGATTTTCTTCAATACC 73750 Query 133312 TTTGTTGTTCTTTAATACCAACAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAG 133371 ||| || || ||||| | |||||| || || | |||||| | |||||| | | Sbjct 73751 ACGGTTATTGCGTAGCACCAATAAGTTTTCTACTTCTAAATGCCATAACGGATAAAATAC 73810 Query 133372 AGTAGCTGCACCACCACGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATG 133431 || || || || || ||||| |||||||||||||| ||||| || || || || || | Sbjct 73811 CGTTGCCGCCCCCCCGCGTACCCCGCCTTGAGAACAGGATTTCACAGCTGTTTGGAAGTA 73870 Query 133432 TTTCCAGAAAGGAATTACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTC 133491 || | || ||||| |||||||| |||||||| | || ||| Sbjct 73871 CTTATAAAATGGAATACAACCAGTATGGAACGCTTCGCCACCGCGGATCGGACTTCCTAA 73930 Query 133492 AGCTCGAATCATACCGGCGTTGATGCCGATACCAGCTCGCTTGCTGATA--TACTTAATA 133549 || || ||| ||||||| || ||||| || ||||| || ||| ||||| || |||| | Sbjct 73931 GGCACGGATCTTACCGGCATTAATGCCAATTCCAGCGCG-TTG-TGATACGTATTTAACA 73988 Query 133550 ATACTGTTACTTGCCGCATTAATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAA 133609 ||| | | | |||||||| || | || ||| | ||||| | |||||| Sbjct 73989 ATAGCGCTCGCGGTGGCATTAATTGAGTCAAGACTATCATCGCACTCAATCAATACACAC 74048 Query 133610 GAACTAAACTGACGAGTAGGAGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAATC 133669 ||||||||||| ||||| ||||| || |||| |||||||| || ||||| | ||||| Sbjct 74049 GAACTAAACTGGCGAGTTGGAGTGCGCACCCCCGCCATAATTGGCGTAGGTAGGGAAATT 74108 Query 133670 TGTCGAGTAGATACAGCGTCATAAAAGCGAATAAT 133704 | || || | || |||||||| || |||| Sbjct 74109 TTAAAGGTGGAAATCGCATCATAAAAACGTTTAAT 74143 >seq916 Length=289624 Score = 109 bits (120), Expect = 6e-19 Identities = 71/77 (92%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 62449 TGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTAACC 62508 ||||||||||| ||||||||||||||| |||||| ||||||||||||| ||||||| ||| Sbjct 161546 TGGTGGCCCCTACTGGACTTGAACCAGTGACCAATCGATTATGAGTCGACTGCTCTGACC 161605 Query 62509 -ACTGAGCTAAGGGGCC 62524 |||||||||||||||| Sbjct 161606 AACTGAGCTAAGGGGCC 161622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511561250417360