Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq911 93.3 6e-14 >seq911 Length=74078 Score = 93.3 bits (102), Expect = 6e-14 Identities = 217/326 (67%), Gaps = 1/326 (0%) Strand=Plus/Minus Query 197593 TATTGAAAGGAAAATAATTGTGAAACAATATCTTGAGATGATGCAGAACATTCTGGACGA 197652 |||| ||||||| | | || |||||||||| | | ||||| || ||||| || || Sbjct 47500 TATT-AAAGGAACGTTAACATGCAACAATATCTGGCTTTAATGCAAAAAATTCTTGATGA 47442 Query 197653 GGGTCATGTTAAAGGCGATCGTACTGGAACAGGGACGCTTTCTGTCTTTGGACGCCAGAT 197712 ||| | ||| ||||| ||||| || || | || | ||||| | || || Sbjct 47441 CGGTGTGGCGAAATCAGATCGCACTGGGGTTGGCACTTTATCCATTTTTGGTCATCAAAT 47382 Query 197713 GCGTTTTGATTTGCGTAAAGGTTTCCCGTTAGTCACGACTAAGAAACTCCACCTGCGTTC 197772 ||| ||| |||||| |||| || ||| | ||||| || || ||| || || ||||| Sbjct 47381 GCGCTTTAATTTGCAGCAAGGCTTTCCGCTCGTCACCACAAAAAAATGTCATCTACGTTC 47322 Query 197773 TATTATCCATGAACTGCTGTGGTTCCTTAGTGGGGATACCAACACCAAATATCTGGAAGA 197832 |||||| |||||| | || ||||| | | || || ||||| | ||||| | || Sbjct 47321 TATTATTCATGAATTACTTTGGTTTTTAAAAGGCGAAACCAATATTGCTTATCTACATGA 47262 Query 197833 TAACGGCGTTACCATTTGGCGGGAGTGGCAAGATGAAAATGGGAACCTTGGCCCCCTGTA 197892 || || || || ||| |||||| ||| |||| || | || || ||| | || Sbjct 47261 CAATAATGTCACTATCTGGGATGAGTGGGCCGATAAAAACGGTGATCTAGGACCCGTTTA 47202 Query 197893 TGGTGCACAATGGAGACGTTGGAAAG 197918 |||| ||||||| | |||| ||| Sbjct 47201 TGGTAAACAATGGCGTGCTTGGCAAG 47176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 769140150659720