Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq320 95.1 9e-15 >seq320 Length=1637695 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/225 (71%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 112067 TTGCCCCATAGTGTCTCCATTGGAATCCATAAATAGGCCCCAGATCTCCCGGGGCTGTAT 112126 |||| ||||||||||||||||| |||||||||| ||| || | |||||| ||| Sbjct 153623 TTGCACCATAGTGTCTCCATTGAAATCCATAAACAGGTCCTAAATCTCCTTCTTTCCTAT 153564 Query 112127 CTGGAAATTGCTCTCTATTCAACAAA-TCACTTCTAATATGAGGATTCCAAATCTTCAC- 112184 ||| || | | | || | || || | | | | | | || ||| || | || Sbjct 153563 CTGTGAAGC-CACAAGAGTCTAGGAACTCGCGTGAACTGTTTGCATCCCATATGTGGACA 153505 Query 112185 TCCTTTAGATGATAACTCTCTTGCATTTGTGGATCCTCTAATAAACCATAGCAATTCTTC 112244 |||||| || ||| ||| | |||||||| ||||||||||||||||||| ||| || || Sbjct 153504 TCCTTTTGACT-TAATTCTTTGGCATTTGTCGATCCTCTAATAAACCATAACAACTCCTC 153446 Query 112245 CACAACCCCTTTCCAGTACACTCTTTTAGTAGTTAGCAGTGGAAA 112289 ||| || || |||| | |||| || |||||||||| ||| || Sbjct 153445 CACTACACCCCTCCAAAATACTCGCTTTGTAGTTAGCAATGGGAA 153401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391919045563117