Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_029057.1 Length=134742 Score E Sequences producing significant alignments: (Bits) Value seq1913 131 1e-25 >seq1913 Length=212763 Score = 131 bits (144), Expect = 1e-25 Identities = 209/300 (70%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 77347 TAAGAAACTACGACAACTCATACTTGCTTTAAAACTACCTGTAACTTCTACAGTTTTATC 77406 ||||||||||||||| | ||| | |||||| ||||| || | || || ||| Sbjct 32616 TAAGAAACTACGACAGCCCATTGGGGTTTTAAATGATCCTGTTACCTTGACCACTTGATC 32557 Query 77407 ATAATTTAAGATATCAGGGTAAAGTCGTTTACTTGAACATTCCAAAGCTAATTGTTTAAT 77466 |||||| | ||||||||| || | ||||||| | ||| || || |||||||||||||| Sbjct 32556 ATAATTAAGGATATCAGGATACATTCGTTTAGCGGCACACTCTAATGCTAATTGTTTAAT 32497 Query 77467 GTCATAGTTCGGATCTTCTGGTTTATGATTTACACCATCCTTTACACTGTAGATTAGTTT 77526 ||| || ||||| ||| |||||||| || ||||| || | ||| || ||| Sbjct 32496 CGTATAATTTTGATCTGTTGGCTTATGATTAACCCCATCTTTGATCGCAAAGACTAATTT 32437 Query 77527 AGGGAAAATTGGTGTTACATGATTCTTACCTAATCCATCAATTTGTGCTTGTAGTATCAT 77586 ||| |||| || ||| |||||| || ||||| ||| |||| | | ||| ||| Sbjct 32436 AGGAAAAACTGCCGTTTTATGATTTTTTCCTAAACCAACAATACGCACACGTAAGATCGA 32377 Query 77587 CTCTTGAACTAATTTAGCTTCCCATGATGTCCCTAATCCAAACCCGACAGAAATAAAAGG 77646 ||||||| ||| | |||||| || ||||| ||||| || | | || |||||| Sbjct 32376 TTCTTGAATTAAGCGTGATTCCCAACTGGTGCCTAAACCAAATCCAAATGTAACAAAAGG 32317 Score = 131 bits (144), Expect = 1e-25 Identities = 209/300 (70%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 76339 TAAGAAACTACGACAACTCATACTTGCTTTAAAACTACCTGTAACTTCTACAGTTTTATC 76398 ||||||||||||||| | ||| | |||||| ||||| || | || || ||| Sbjct 32616 TAAGAAACTACGACAGCCCATTGGGGTTTTAAATGATCCTGTTACCTTGACCACTTGATC 32557 Query 76399 ATAATTTAAGATATCAGGGTAAAGTCGTTTACTTGAACATTCCAAAGCTAATTGTTTAAT 76458 |||||| | ||||||||| || | ||||||| | ||| || || |||||||||||||| Sbjct 32556 ATAATTAAGGATATCAGGATACATTCGTTTAGCGGCACACTCTAATGCTAATTGTTTAAT 32497 Query 76459 GTCATAGTTCGGATCTTCTGGTTTATGATTTACACCATCCTTTACACTGTAGATTAGTTT 76518 ||| || ||||| ||| |||||||| || ||||| || | ||| || ||| Sbjct 32496 CGTATAATTTTGATCTGTTGGCTTATGATTAACCCCATCTTTGATCGCAAAGACTAATTT 32437 Query 76519 AGGGAAAATTGGTGTTACATGATTCTTACCTAATCCATCAATTTGTGCTTGTAGTATCAT 76578 ||| |||| || ||| |||||| || ||||| ||| |||| | | ||| ||| Sbjct 32436 AGGAAAAACTGCCGTTTTATGATTTTTTCCTAAACCAACAATACGCACACGTAAGATCGA 32377 Query 76579 CTCTTGAACTAATTTAGCTTCCCATGATGTCCCTAATCCAAACCCGACAGAAATAAAAGG 76638 ||||||| ||| | |||||| || ||||| ||||| || | | || |||||| Sbjct 32376 TTCTTGAATTAAGCGTGATTCCCAACTGGTGCCTAAACCAAATCCAAATGTAACAAAAGG 32317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 431020396254897