Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq2331 104 3e-17 >seq2331 Length=68774 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62572 CGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATC 62631 ||||||||||| | ||||| || ||||| || || ||||| || ||||| | || || Sbjct 23777 CGTCGTGAAACGTTAGAAGACGCGGTTAAACACCCTGAAAACTACCCGCAATTAACTATT 23718 Query 62632 CGTGTATCCGGTTATGCAGTTCGCTTTAACTCTCTGACTCCGGAACAGCAGCGCGACGTT 62691 ||||| || |||||||| || || ||||| || | || || ||||| || || |||||| Sbjct 23717 CGTGTTTCTGGTTATGCGGTGCGTTTTAATTCATTAACGCCAGAACAACAACGTGACGTT 23658 Query 62692 ATCGCTCGTACCTTCAC 62708 || |||||||| || || Sbjct 23657 ATTGCTCGTACTTTTAC 23641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546298036477200