Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_031062.1 Length=75147 Score E Sequences producing significant alignments: (Bits) Value seq1614 84.2 1e-11 >seq1614 Length=125919 Score = 84.2 bits (92), Expect = 1e-11 Identities = 89/116 (77%), Gaps = 6/116 (5%) Strand=Plus/Plus Query 41674 CACTGGTTCGAATCCAGTATCTTCCTCCATCTTCA-----GGTCGTTAGCTCAGTTGGTT 41728 |||||||||||| || ||||| || |||||| | ||||||||||||||| ||| Sbjct 38126 CACTGGTTCGAACCCGGTATCACCCACCATCTCTAAGATGGGTCGTTAGCTCAGTCGGT- 38184 Query 41729 AGAGCACCGGACTTTTAATCCGGATGTCATTGGTTCGAGGCCAATACGACCTACCA 41784 |||||| ||||||||||||||| ||| ||||||| || |||||| |||| Sbjct 38185 AGAGCAGCGGACTTTTAATCCGTTGGTCGAAGGTTCGAATCCTTCACGACCCACCA 38240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 240329316510492