Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_031065.1 Length=159878 Score E Sequences producing significant alignments: (Bits) Value seq2372 170 2e-37 >seq2372 Length=84335 Score = 170 bits (188), Expect = 2e-37 Identities = 313/455 (69%), Gaps = 4/455 (1%) Strand=Plus/Plus Query 132573 CATCAAATCATTGATTTGCAGACCATAATCTAGATGACGAATACGGTTTTCATCTACACC 132632 ||| || | ||| ||||| | |||||||||| ||| || | || ||||| || | ||| Sbjct 73691 CATTAATTTATTAATTTGTACCCCATAATCTAAATGGCGCACGCGATTTTCTTCAATACC 73750 Query 132633 TTTGTTGTTCTTTAATACAAGCAGGTTTTCAACTTCTAGATGCCACATTGGATAATAAAG 132692 ||| || || || | | |||||| ||||||| |||||| | |||||| | | Sbjct 73751 ACGGTTATTGCGTAGCACCAATAAGTTTTCTACTTCTAAATGCCATAACGGATAAAATAC 73810 Query 132693 AGTAGCTGCACCACCACGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATG 132752 || || || || || ||||| |||||||||||||| ||||| || || || || || | Sbjct 73811 CGTTGCCGCCCCCCCGCGTACCCCGCCTTGAGAACAGGATTTCACAGCTGTTTGGAAGTA 73870 Query 132753 TTTCCAAAAAGGAATTACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTC 132812 || |||| ||||| |||||||| |||||||| | || ||| Sbjct 73871 CTTATAAAATGGAATACAACCAGTATGGAACGCTTCGCCACCGCGGATCGGACTTCCTAA 73930 Query 132813 AGCTCGAATCATACCGGCGTTGATGCCTATACCAGCTCGCTTGCTGATA--TACTTAATA 132870 || || ||| ||||||| || ||||| || ||||| || ||| ||||| || |||| | Sbjct 73931 GGCACGGATCTTACCGGCATTAATGCCAATTCCAGCGCG-TTG-TGATACGTATTTAACA 73988 Query 132871 ATACTGTTACTTGCCGCATTAATAGAATTCAGTGAATCGCCAGCTTCGATAACTACACAA 132930 ||| | | | |||||||| || | || ||| | || || | |||||| Sbjct 73989 ATAGCGCTCGCGGTGGCATTAATTGAGTCAAGACTATCATCGCACTCAATCAATACACAC 74048 Query 132931 GAACTAAATTGACGAGTAGGAGTACGAGCCCCCGCCATAATTGGTGTAGGTAATGAAATC 132990 |||||||| || ||||| ||||| || |||||||||||||||| ||||||| ||||| Sbjct 74049 GAACTAAACTGGCGAGTTGGAGTGCGCACCCCCGCCATAATTGGCGTAGGTAGGGAAATT 74108 Query 132991 TGTCGAGTAGATACAGCATCATAAAAGCGAATAAT 133025 | || || | ||||||||||| || |||| Sbjct 74109 TTAAAGGTGGAAATCGCATCATAAAAACGTTTAAT 74143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511446058422320