Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_031117.1 Length=44885 Score E Sequences producing significant alignments: (Bits) Value seq1614 80.6 8e-11 >seq1614 Length=125919 Score = 80.6 bits (88), Expect = 8e-11 Identities = 98/134 (73%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 32438 TCTGACATTCGTGAGTCGGGATCTATTGAAGAGGACGCAGATGTGATCATGTTTATATAT 32497 ||||| | || || || || || ||||| | || || |||||||| |||||||| ||| Sbjct 70933 TCTGATTTACGAGAATCCGGTTCAATTGAGCAAGATGCGGATGTGATTATGTTTATTTAT 70874 Query 32498 CGTGATGAGTATTATGATAAAAACTCAAAGGATCAAGGTATTGCTGAAATAATTGTAGCT 32557 |||||||| |||| || |||| || | || |||||||||| ||||| || | | | Sbjct 70873 CGTGATGAAGTTTATCATGAAAATTCTGATCATAAAGGTATTGCAGAAATCATACTTGGT 70814 Query 32558 AAAGCGCGTGATGG 32571 || |||| |||| Sbjct 70813 AAGCAGCGTAATGG 70800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143500926430026