Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_031127.1 Length=240761 Score E Sequences producing significant alignments: (Bits) Value seq911 147 3e-30 >seq911 Length=74078 Score = 147 bits (162), Expect = 3e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 196086 GGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGACCTGCGCAAAGGGTTCCCGCTG 196145 ||||| | || ||||| || |||| ||||| ||| | ||| |||| || ||||| Sbjct 47410 GGCACTTTATCCATTTTTGGTCATCAAATGCGCTTTAATTTGCAGCAAGGCTTTCCGCTC 47351 Query 196146 GTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCACGAACTGTTGTGGTTCCTGAAC 196205 |||||||| ||||| | || || || ||||| || || ||| | | ||||| | || Sbjct 47350 GTCACCACAAAAAAATGTCATCTACGTTCTATTATTCATGAATTACTTTGGTTTTTAAAA 47291 Query 196206 GGCGACACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTGGGATGAGTGGGCA 196265 ||||| ||||| || ||||| | ||||| || |||| |||||||||||||||||| Sbjct 47290 GGCGAAACCAATATTGCTTATCTACATGACAATAATGTCACTATCTGGGATGAGTGGGCC 47231 Query 196266 GATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCAGTGGCGTGCATGG 196316 ||| || | || ||||| || ||||| || ||||| || |||||||| ||| Sbjct 47230 GATAAAAACGGTGATCTAGGACCCGTTTATGGTAAACAATGGCGTGCTTGG 47180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 770253673278440