Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20terrestris_20[refseq_20GCF_5F000214255.1_202011-06-03] 5,609 sequences; 248,654,244 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq15 125 7e-24 >seq15 Length=11467329 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851 ||||||||| || |||||||| |||||||| ||||| | | |||||||||||||| | Sbjct 5183050 TAATCTATCAGCAACAAATTCGATATATTGACACATAAGTGTACAGTTCATTCCTATCAT 5182991 Query 16852 ACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 | || || | ||| ||||| |||||| ||| || || || || || |||||||| Sbjct 5182990 TTGAACAGGTAAAGCGTCCGTTAAAAATTCTTGTTCAATTTTGACAGCATCTTTAATAAT 5182931 Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971 | || || || |||||| | ||| || |||||| ||||| | ||||||||| Sbjct 5182930 TGACGTGACCCGATCGCAAGACGGTTTTTGTACAATATGTTTGAACATTAAACATGCGAA 5182871 Query 16972 ATCGCAATGTAATCCCT 16988 ||| ||||||||||||| Sbjct 5182870 ATCACAATGTAATCCCT 5182854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517509313584120