Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20terrestris_20[refseq_20GCF_5F000214255.1_202011-06-03] 5,609 sequences; 248,654,244 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq382 91.5 1e-13 >seq382 Length=5783 Score = 91.5 bits (100), Expect = 1e-13 Identities = 175/252 (69%), Gaps = 6/252 (2%) Strand=Plus/Minus Query 101759 TGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCC 101818 || || | |||| ||||||| | |||||| || || || ||||| || || | ||| Sbjct 1455 TGTGCCAGCATGTAAGTTAACAAAGAATAAGATGCGATATTGAATGGTACGCCAAGACCC 1396 Query 101819 ATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATT-G 101877 || ||||| ||||||||| |||||||| || | || ||||| |||||||||| | Sbjct 1395 ATGTCAGCGCTTCTTTGATAAAGTTGACATGATAACTCTCCATTGTTCACATAAAATTGG 1336 Query 101878 ACTTAATACA-TGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCAC 101936 || || ||| ||||| || || | |||||| | |||||| ||||| || Sbjct 1335 AC--AAGACAGTGACAGGGAGGTAGAGCCATTTCTGAAATGTCGCCTGGGTTCCATGCTG 1278 Query 101937 ACATTAACATCCTTCTATCTGTAGG-GTTTGTTTTTATAGTATCAATCAACTGTTTTAAT 101995 |||||| || | |||||| | || | || || ||| |||| || | ||||||||| Sbjct 1277 ACATTATAATTCGTCTATCATTGGGAGAATG-TTGTATCTTATCTATGATCTGTTTTAAC 1219 Query 101996 TGGTCAACTCCT 102007 || || | |||| Sbjct 1218 TGATCTATTCCT 1207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361226504980859