Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20terrestris_20[refseq_20GCF_5F000214255.1_202011-06-03] 5,609 sequences; 248,654,244 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 6e-11 >seq1 Length=17153651 Score = 82.4 bits (90), Expect = 6e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 115420 TGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTC 115479 ||| ||||||||| ||||||||| | ||| | | ||||||||||| || |||||||| Sbjct 7345198 TGCTGGCAAACAACTAGAAGATGGAAGAACTCTTTCGGATTATAACATCCAGAAAGAGTC 7345257 Query 115480 TACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||| | ||| | ||||||||| | || ||||||| Sbjct 7345258 TACAAGCCATTTAGTGTTGAGACTTCGCGGAGGAA 7345292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425314923617080