Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bombus_20terrestris_20[refseq_20GCF_5F000214255.1_202011-06-03]
5,609 sequences; 248,654,244 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq16 96.9 4e-15
>seq16
Length=5274633
Score = 96.9 bits (106), Expect = 4e-15
Identities = 166/241 (69%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 154864 TGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGAC 154923
|||| ||| | ||||| ||||| || || || | || || ||||| | | |
Sbjct 3661858 TGTCTTGTCTGATGATAACATATCCGTCGACGAACGGCGTGTTTGAGGAGACCGTCGCTG 3661799
Query 154924 AGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAA 154983
| || ||| | || |||||||| ||| ||||| || ||||| || || || || | |
Sbjct 3661798 ATATTTGTGATATGGTTCATGAAGCTGGAGGTCAAGTGTATCTAGACGGTGCTAACATGA 3661739
Query 154984 ATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACT 155043
|||| || || || ||| || |||| ||||| || || | |||||||| |
Sbjct 3661738 ATGCTCAAGTTGGTCTATGTCGTCCTGGTGATTATGGCAGTGACGTTTCGCATCTAAATT 3661679
Query 155044 TACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTG 155103
|||| |||||||||||||| || || || |||||||| ||||| |||||||| || |
Sbjct 3661678 TACACAAAACATTCTGTATACCTCACGGCGGTGGAGGACCTGGAAGTGGTCCTATTGGAG 3661619
Query 155104 T 155104
|
Sbjct 3661618 T 3661618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579172189942560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |