Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20terrestris_20[refseq_20GCF_5F000214255.1_202011-06-03] 5,609 sequences; 248,654,244 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq382 105 9e-18 seq15 93.3 6e-14 >seq382 Length=5783 Score = 105 bits (116), Expect = 9e-18 Identities = 161/222 (73%), Gaps = 7/222 (3%) Strand=Plus/Plus Query 104867 GAATTATTATGGGTGATGAAAGGTTTAACAAATTCTAACTTGTTAAATGAAATTGGTGTT 104926 || || |||||| | || | ||| | |||||| | || |||| | ||| | ||| Sbjct 916 GAGTTGTTATGGTTTATTAGAGGATCGACAAATGCCAAAGAATTAAGTCAAAAGGATGTC 975 Query 104927 AAAGTATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCACTT-TCG 104985 | ||||| ||| || |||||||| |||| |||| |||||||| || ||| | | Sbjct 976 CACATATGGGATGCAAACAGTTCACGTGAGTTCCTAGACTCTTGTGGCTT-CACAAATAG 1034 Query 104986 AAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATA 105045 ||||||||| ||||||||||| ||||||||||||||||||||||| ||| | ||| Sbjct 1035 AAAAGAAGGAGATTTAGGACCTGTTTATGGATTTCAATGGAGACATTATGGTG--CAAAG 1092 Query 105046 TATC-GACTGT-GATACCGACTATACCGGCCAAGGTATAGAC 105085 || | | | | ||||| || |||| || ||||||| |||| Sbjct 1093 TACCAAAATATGGATACAGATTATAGTGGACAAGGTA-AGAC 1133 >seq15 Length=11467329 Score = 93.3 bits (102), Expect = 6e-14 Identities = 124/170 (73%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 126591 CGTATACCAGAAATTGGAGACAAATTTTGTTCT-GGAATGGCCCAAAAAGGAACTTGTGG 126649 ||||| ||| ||||||| || |||||| |||| || |||| | ||||||| |||||||| Sbjct 10911238 CGTATTCCACAAATTGGTGATAAATTTGCTTCTCGGCATGGAC-AAAAAGGTACTTGTGG 10911296 Query 126650 TATGATTTATGCACAAGAAGATATGCCGTTTACACAATCAGGTATGACCCCCGATATTAT 126709 || || ||||||||||||||| ||| || |||| | || || || ||||| Sbjct 10911297 AATTCAATACAGACAAGAAGATATGCCATTTTCATGTGAAGGTCTCACGCCAGACATTAT 10911356 Query 126710 AATTAATCCAAATTGTATACCGTCAAGAATGACCATAAATCAAATAATTG 126759 ||||||||| || ||| || || | ||||| || ||| |||||| Sbjct 10911357 AATTAATCCTCATGCTATCCCATCGCGTATGACTATTGGTCACTTAATTG 10911406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658357037705640