Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20terrestris_20[refseq_20GCF_5F000214255.1_202011-06-03] 5,609 sequences; 248,654,244 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq9 304 8e-77 seq4 163 2e-34 seq41 147 1e-29 seq172 140 2e-27 seq3 129 4e-24 seq1 122 6e-22 seq741 114 8e-20 seq5 113 3e-19 >seq9 Length=15655298 Score = 304 bits (336), Expect = 8e-77 Identities = 646/946 (68%), Gaps = 30/946 (3%) Strand=Plus/Minus Query 475338 TCGAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAG 475397 |||||||||| |||| || | ||||||| ||||| | |||||||| || |||| Sbjct 1034873 TCGAAGATGGCATTTTTGAGGTCAAGTCAACAGCAGGAGACACTCATCTTGGCGGCGAAG 1034814 Query 475398 ATTTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGT 475455 |||| || ||| | | || |||| | ||| |||| ||||| | ||| | || Sbjct 1034813 ATTTCGACAATCGTATGGTCAATCAC--TTTGTCCAAGAATTCAAACGCAAATACAAGAA 1034756 Query 475456 TGATCTTTCAACATCTGCTAAA---GCATTAAGACGTCTTAGAACTGCTTGTGAACGTGC 475512 ||||| | || | ||| || | | ||| | ||||| ||||| |||||||| Sbjct 1034755 AGATCTGACTGCAAAT---AAACGCGCCCTTCGTCGTTTGAGAACAGCTTGCGAACGTGC 1034699 Query 475513 TAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGG 475572 || || || | ||||| |||||||| ||| | | ||| ||||||| || | ||| || Sbjct 1034698 GAAACGCACTTTGTCTTCGTCTACTCAAGCTAGTATCGAAATTGATTCGCTCTATGAGGG 1034639 Query 475573 AATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTT 475632 |||||| | | |||| || || || ||| ||| ||||| ||||| |||||||||| Sbjct 1034638 AATTGACTTTTATACCTCAATCACCAGAGCTCGATTCGAAGAGCTTTGTGCTGATCTCTT 1034579 Query 475633 TAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACA 475692 |||| |||| | || || || ||| || | | ||| | ||| | || ||| | || Sbjct 1034578 TAGAGGAACACTCGAGCCAGTGGAAAAATCGTTGCGCGATGCCAAAATGGATAAAGCTCA 1034519 Query 475693 AGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCT 475752 | || || || ||| | || || || || || | ||||| || || | | | || Sbjct 1034518 GATTCACGATATCGTTTTAGTTGGTGGATCCACGCGTATTCCTAAGATCCAAAAGTTACT 1034459 Query 475753 TTCATCATAT-TTTAATGGTAAAAAGTTAAATGAAAGTGTA--AATCCTGATGAAGCTGT 475809 || | | |||||||| || | || || |||| || || |||||||||||||| Sbjct 1034458 G-CAGGACTTCTTTAATGGGAAGGAATTGAAC--AAGTCTATCAACCCTGATGAAGCTGT 1034402 Query 475810 TGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT--CAA-TCAGACGAGAAACT 475866 || |||||||||||||| ||||| |||||| || ||| ||| || || || || Sbjct 1034401 AGCTTATGGAGCTGCTGTACAAGCTGCTATTCTACATGGTGACAAGTCTGAAGAAGTACA 1034342 Query 475867 AAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGG 475926 | || || || ||| |||| ||||| || | || | ||| ||||||| | ||| || Sbjct 1034341 AGATC-TACTG--CTTCTTGATGTAACACCTTTGTCTCTTGGTATTGAAACTGCTGGTGG 1034285 Query 475927 GATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAA---TCAAAAGT 475983 |||||||| |||||| | ||||||||| |||| ||| ||||| | ||||| | Sbjct 1034284 TGTTATGACTGCTCTTATCAAGAGAAATACTACTATTCCAA-CAAAACAGACTCAAACCT 1034226 Query 475984 ATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAG 476043 | | || ||| ||||||||||| || ||| || ||| | | |||||||||| | Sbjct 1034225 --TCACTACATATGCTGATAATCAACCAGGAGTATTGATTCAAGTTTATGAAGGTGAACG 1034168 Query 476044 AAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGC 476103 | || || ||||| ||| | | || | ||| | || |||||||| || || Sbjct 1034167 TGCTATGACAAAGGATAACAACTTATTAGGTAAATTTGAGCTCAGTGGTATTCCACCAGC 1034108 Query 476104 TCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAA 476163 || ||||||||||||| |||||||| || ||||| |||||||| ||||||||||| || Sbjct 1034107 CCCTCGAGGAGTTCCTCAGATTGAAGTCACATTTGACATTGATGCCAATGGTATTCTGAA 1034048 Query 476164 TGTTACTGCTTGTGATAAATCTAGT-AACAAGAGTAAAAATATAACTATTACAAACAATC 476222 ||| |||| |||||||||| | ||||| || || || || ||||| || | Sbjct 1034047 TGTCTCTGCAGTGGATAAATCTACTGGGAAAGAG-AACAAAATTACCATTACCAATGACA 1033989 Query 476223 GTGGTAGATTTACTGAAGAACAAATTCAACGTATGGTTGATGAAGC 476268 ||| | ||| ||||| | ||| || | ||||| ||||||| Sbjct 1033988 AAGGTCGTCTTAGCAAAGAAGACATTGAAAGAATGGTCAATGAAGC 1033943 Score = 102 bits (112), Expect = 5e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| ||||||||||| | || || |||||| || || | ||| | || | || || Sbjct 1036809 TGCAGTTGGTATTGATCTCGGCACCACTTACTCCTGCGTTGGTGTATTCCAGCACGGGAA 1036750 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 || ||||| || |||||||| ||||| ||| | |||||||| |||||| | || || Sbjct 1036749 GGTGGAAATCATCGCCAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTCAC 1036690 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAG 474488 |||||||||| | ||||| |||||||| ||| | |||| Sbjct 1036689 CGAAACTGAACGGTTAATTGGTGATGCTGCCAAAAACCAAG 1036649 >seq4 Length=14241696 Score = 163 bits (180), Expect = 2e-34 Identities = 406/600 (68%), Gaps = 36/600 (6%) Strand=Plus/Plus Query 297085 TTTGATAATTGGTTACAATCTTCAGTGGATTGGTGTATTTCAAGAAGTAGATATTGGGGA 297144 |||| |||||||||| | | | |||||| |||| |||| |||||||||| Sbjct 7355486 TTTGGTAATTGGTTAAGAGATGCTCGTGATTGGGCTATTAGTAGAAACCGATATTGGGGC 7355545 Query 297145 ACACCAATTCCAATTTGGAAATCTGATGATGGTGAAGAAATAATTTGTATTGGTTCACTT 297204 | |||||||| | |||| || || ||||| ||||||| | ||| | || | Sbjct 7355546 AACCCAATTCCTTTATGGATTTCAGAAGATGGGCAAGAAATTGTATGTGTAGGAAGTATA 7355605 Query 297205 GAAGAATTAAAAGAATTTTCAGGAATTGATAATATTAAT-GATTTACATATTGATAAAAT 297263 | |||||| ||||||| | ||| | || | ||| ||| | |||| || | || Sbjct 7355606 GCAGAATTGGAAGAATTGACT--AAT--ACAAAAGTAACAGATATTCATAGAGAAAGTAT 7355661 Query 297264 TGATCAAATAAAAATTCCTTCTCGTAAAGGAAAAGGCATGTT-ATCT------CGTGTTA 297316 ||||| ||| || || || || || ||| |||| | || || || Sbjct 7355662 AGATCATTTAACTATACCATCA---AACCGACCAGG-ATGTCCACCTTTACGACGAGTAC 7355717 Query 297317 CCGGTGTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATC 297376 | | || || || |||||||||||||| || || ||||| |||| ||||| ||||||| Sbjct 7355718 CTGAAGTATTTGACTGTTGGTTTGAATCTGGGTCAATGCCATATGCACAAATGCATTATC 7355777 Query 297377 CTTTTGAAAATTCCGAAATTTTAGACACTTCACAAGA-TTATATTGCAGATTTTATAACA 297435 ||||||||||| || || ||| | || | ||| || | || |||||||| | Sbjct 7355778 CTTTTGAAAAT--CGGAA----AGA-ATTTGAAGAGAATTTTCCAGCTGATTTTATTGGA 7355830 Query 297436 GAATCAATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATA 297495 ||| ||||||||||| | || |||||||| |||||||||||| | || |||||| | Sbjct 7355831 GAAGGTATTGATCAAACTCGTGGATGGTTTTACACTTTATTAGTTATATCAACAGCTCTT 7355890 Query 297496 TTTAACAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTA-ACGCAGCTGATGG 297554 ||| ||| | ||||||||||| || | | || | | ||| || ||| ||||||| Sbjct 7355891 TTTGGGAAAGCTCCATTTAAAAATCTAGTAGCTA-ATGGTTTGATACTTGCATCTGATGG 7355949 Query 297555 ACAAAAAATGTCAAAAAGTAAAGGTAATTATCCTGATCC---AAATATTTTGATGGATAA 297611 |||||| ||||| ||| ||||| |||||||| ||||| ||| | | |||| Sbjct 7355950 ACAAAAGATGTCTAAACGTAAAAAGAATTATCCAGATCCTGTGGGAATTGTTA---ATAA 7356006 Query 297612 ATATGGTGCAGATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAGCCGAA 297669 ||||| |||||| || | ||| | || ||| || || | ||||| || | ||| ||| Sbjct 7356007 GTATGGAGCAGATGCTCTTCGTTTATACTTA--ATTAATTCTCCTGTTGTAAGAGCAGAA 7356064 Score = 109 bits (120), Expect = 4e-18 Identities = 124/164 (76%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 817098 TAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAA 817157 ||||||| || ||| ||||| || || ||||||||| ||||||| || || ||||| | Sbjct 3603183 TAGATTTCTCTAGTCCTAATATCGCTAAAGAAATGCATGTTGGACATTTAAGGTCTACTA 3603242 Query 817158 TAATTGGTGAATCTCTTTGTA-GAATATATGAATTTTGTGGATGTGAAGTACAAAGAATA 817216 ||||||| || | | | | | || | | ||||||| ||| || ||| ||||| Sbjct 3603243 TAATTGGAGA-TAGCATCGCAAGATTGTTAGAATTTTTAGGACACGATGTATTGCGAATA 3603301 Query 817217 AATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 817260 |||||||||||||| ||||| || |||||||| |||||||| || Sbjct 3603302 AATCATATTGGTGACTGGGGTACTCAATTTGGAATGTTAATAGC 3603345 Score = 105 bits (116), Expect = 4e-17 Identities = 150/209 (72%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 296071 AGAATTGGAAGATGGATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATG 296130 |||||||| |||||||| ||| | || ||||| ||||||||| | || | |||| Sbjct 7354562 AGAATTGGCAGATGGATAGATTTCAAAAATGATTATAAAACATTATATCCTTGGTATATG 7354621 Query 296131 GAATCTGTTATTTGGTCATTTAAACAACTTTATGAAAAGGAAATGATTTTTG--AAGGTT 296188 ||||| || ||| |||||| || | || | || |||| | | | ||||| Sbjct 7354622 GAATCCATTTGGTGGATTTTTAAAGAATTATACAATAA--AAATCTTGTATACCAAGGTG 7354679 Query 296189 ATAAAGTTATGCCTTATTCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAAC 296248 |||||| ||||||| |||||| ||||| || || || |||||| ||||||| || | Sbjct 7354680 TTAAAGTAATGCCTTTTTCTACGGGTTGTAACACTCCTTTATCTAATTTTGAATCAGGGC 7354739 Query 296249 AAAATTATAAAGAGATTATTGATCCATCT 296277 | ||||||||||| || ||||||| ||| Sbjct 7354740 AGAATTATAAAGATGTTGTTGATCCTTCT 7354768 >seq41 Length=919255 Score = 147 bits (162), Expect = 1e-29 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| || || ||||||||||| || ||| || || ||||||||| | || || Sbjct 762769 ACGAAGGCGAAGGACAAGATGAAGAGTCGATTCCTTTTGAATATTATAATCGGAGAGCGT 762828 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||||||||||||||||||||||| || | | ||||||||| || |||||||| Sbjct 762829 ACGTCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAACCTTTGTTGATCCGGCGGAATTCC 762888 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||||||||||||| ||| ||| || ||||||||||| | | | |||||| Sbjct 762889 TTCCTTGTCTTGAATTTTTGCTTTCACGTTCTCAATAGTATCGGAAGCTTCAACTTCAAG 762948 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || |||||||| || || || ||||| ||||| || || Sbjct 762949 TGTGATAGTTTTTCCTGTCAGTGTCTTGACGAAGATCTG 762987 Score = 145 bits (160), Expect = 5e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 ||||| || ||||||||||| || ||| || || ||||||||||| || || | Sbjct 762545 AGACGAAGAACAAGATGAAGAGTCGATTCCTTTTGAATATTATAATCAGAGAGTGTACGT 762604 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 |||||| ||||| || |||||||| || | | |||||| || ||||| ||||||||| Sbjct 762605 CCATCTTCCAGTTGTTTACCAGCAAAGATCAACCTTTGTTGGTCTGGAGGGATTCCTTCC 762664 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTA 480734 ||||||||||| ||| ||| || ||||||||||| | | | |||||| || Sbjct 762665 TTGTCTTGAATTTTTGCTTTCACGTTCTCAATAGTATCGGAAGCTTCAACTTCAAGAGTT 762724 Query 480735 ATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||||| || || || ||||| ||||||||||| Sbjct 762725 ATAGTTTTCCCTGTAAGGGTCTTGACGAAAATTTG 762759 Score = 122 bits (134), Expect = 6e-22 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATG-AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||| || |||||||| ||| | || |||| | | ||| ||||||| || || Sbjct 762314 CGAAGACGAAGCACAAGATGCAAGGTTGATTCCTTTTGTAT-ATTGTAATCAGAAAGTGT 762372 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| | ||| || ||||| || || | | ||||| || ||||||||||| Sbjct 762373 GCGCCCATCTTCCAATTGTTTACCAGCGAAGATCAACCTCTGTTGGTCTGGAGGAATTCC 762432 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||||||||||||| ||| ||| ||| ||||||||||||| | | |||||| Sbjct 762433 TTCCTTGTCTTGAATTTTTGCTTTCACATTCTCAATAGTATCAGAAGCTTCAACTTCAAG 762492 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||||| || || || || || || |||||||| Sbjct 762493 AGTTATTGTTTTTCCTGTAAGGGTTTTTACAAAAATTTG 762531 >seq172 Length=1724251 Score = 140 bits (154), Expect = 2e-27 Identities = 141/181 (78%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||||||||| | ||||| | |||||| | |||||||||||||||||||||||| Sbjct 1092403 AATATTATAATCTGACAGAGTACGTCCATCTTCCAATTGCTTTCCAGCAAAAATAAGACG 1092344 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||| |||||||| ||||||||||||||||| || || || ||| ||| ||||||||| Sbjct 1092343 TTGCTGATCAGGTGGAATTCCTTCCTTGTCCTGGATTTTAGCTTTTACATTTTCAATAGT 1092284 Query 480710 ATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTT 480768 ||| | || | | ||||||||| || |||||||| || | ||| || || || || | Sbjct 1092283 ATCTGATGCTTCTA-CTTCAAGGGTGATGGTTTTACCAGTCAAAGTTTTCACAAATATCT 1092225 Query 480769 G 480769 | Sbjct 1092224 G 1092224 >seq3 Length=14656165 Score = 129 bits (142), Expect = 4e-24 Identities = 276/401 (69%), Gaps = 15/401 (4%) Strand=Plus/Minus Query 474378 AAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATG 474437 ||||||| | || ||| || || |||||||| ||||| || |||| ||||| || |||| Sbjct 1113685 AAAATGGAAGAGCAGAGATTATAGCCAATGATCAAGGAAACAGAATTACACCTTCTTATG 1113626 Query 474438 TTTCTTTTACTG---AAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTG-CA 474493 | | ||||||| | ||||| | | |||||||||||||| || ||||| ||| | Sbjct 1113625 TGGCATTTACTGCTGATGGTGAACGTTTAATTGGAGATGCTGCAAAGAATCAA-CTGACT 1113567 Query 474494 TCTAATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCG-TAATTTTGATGA 474552 | ||||||| ||||| |||||||||| ||| |||| |||||| | ||| | | || Sbjct 1113566 ACAAATCCTGAGAATACAGTTTTTGATGCCAAACGATTAATTGGTAGAGAATGGTCA-GA 1113508 Query 474553 TACCACTGTCCAATCTGATAT-GCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTA 474611 | | ||||| ||| |||||| || || || ||||| || || | | | | Sbjct 1113507 TCCTACTGTACAACGTGATATCAAGTTCTT-TCCATTTAAAGTAATTGAGAAAAATAGCA 1113449 Query 474612 AACCATATAT-AGAA--GCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAA 474668 | ||| |||| |||| ||| | | ||||| ||| ||| |||| ||| ||| Sbjct 1113448 AGCCACATATAAGAATGGCAGTTAA---TGGTGAGGAAAAAGTGTTTGCACCTGAAGAAA 1113392 Query 474669 TTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAG 474728 | ||| | ||||| | | |||||||| | || || |||| | || || ||| Sbjct 1113391 TCTCTGCTATGGTACTTGGTAAAATGAAGGAGACAGCAGAAGCATACTTAGGCAAAAAAG 1113332 Query 474729 TAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGAT 474769 | ||| |||| || ||||||| ||||| |||||||| ||| Sbjct 1113331 TTACTCATGCTGTTGTTACTGTACCAGCTTATTTTAACGAT 1113291 Score = 91.5 bits (100), Expect = 1e-12 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 475941 TTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTG 476000 || || |||| ||||| || || ||| ||||| || | || || ||| |||| Sbjct 1112205 TTGTTTACAGGAATACCGTGATTCCGACCAAGAAATCGCAAATCTTCTCTACTGCGTCTG 1112146 Query 476001 ATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATA 476060 |||||||| || ||||| |||||| | | ||||||||| | | | || ||||| | Sbjct 1112145 ATAATCAACATACAGTAACTATCCAAGTATACGAAGGTGAACGTCCAATGACAAAAGACA 1112086 Query 476061 ATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTC 476120 | | || || | || ||||| || || || || || || ||||| | || | Sbjct 1112085 ACCATCTTCTGGGTAAATTCGATCTTACTGGCATCCCACCAGCACCAAGAGGTATACCAC 1112026 Query 476121 AAATTGAAGTTACTTTTGATATTGATGCAAATGGTATT 476158 ||||||||||||| ||||| || ||||| ||||||||| Sbjct 1112025 AAATTGAAGTTACCTTTGAAATCGATGCTAATGGTATT 1111988 >seq1 Length=17153651 Score = 122 bits (134), Expect = 6e-22 Identities = 115/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 474727 AGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAAC 474786 ||||| |||| |||||||||||||| |||||||| |||||||| ||| | ||||| || Sbjct 8553245 AGTAAAAAATGCTGTAATTACTGTTCCTGCATATTTCAATGATTCCCAAAGACAAGCTAC 8553304 Query 474787 TAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGC 474846 || ||||| || |||| | || |||||||| | | | ||||||||||||||||| Sbjct 8553305 CAAGGATGCTGGTCAAATTTCGGGGCTTAATGTACTTAGGGTAATTAATGAACCAACAGC 8553364 Query 474847 AGCCGCACTTGCTTATGGTCTTGATAA 474873 ||| || ||||| ||||| | ||||| Sbjct 8553365 AGCTGCCCTTGCATATGGCATGGATAA 8553391 Score = 111 bits (122), Expect = 1e-18 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 |||||||| | |||||||| |||||| ||||| || |||||||| || | ||| || Sbjct 7345242 TTATAATCCGAAAGAGTTCTTCCATCTTCTAGTTGTTTGCCAGCAAAGATCAAACGCTGC 7345183 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || || |||||||| || || |||||||| |||||| ||| ||| || || || ||| Sbjct 7345182 TGGTCTGGAGGAATACCCTCTTTGTCTTGGATCTTTGCTTTAACATTCTCTATTGTGTCA 7345123 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | |||||| ||||||||||| || || | || |||||||| || || Sbjct 7345122 GAAGCTTCAACTTCAAGAGTAATAGTTTTCCCTGTTAAGGTTTTAACGAAGATCTG 7345067 >seq741 Length=1302912 Score = 114 bits (126), Expect = 8e-20 Identities = 154/209 (74%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 355189 ATTCTA-ATAATATTTTCATGAATGTCTCTTGGATTACATGGTGGAACATTTGTTGAATA 355247 |||||| |||| ||||||| || ||||| |||||| | ||| | ||||| | Sbjct 751600 ATTCTATATAA-ATTTTCAATTATTTCTCTAGGATTATAATTTGGTATCTTTGTCATCCA 751542 Query 355248 TCCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAAA 355307 |||||| |||||||| || | ||||| ||||| | |||||| || ||||||||||| Sbjct 751541 TCCAGTACCAATACCATCAGCACCATTCACTAATACCATTGGTATAGTTGGTACATAAAA 751482 Query 355308 TACTGGTTCAATCATTTTATTATCTTCAAATTGATGTTGCAATACATCAAAATCATGTTG 355367 || |||||||| ||| |||||| ||| ||| ||||| |||| | | |||||||| Sbjct 751481 GACAGGTTCAATTTTTTGATTATCATCATATTCATGTTTTAATAAAGGATCATCATGTT- 751423 Query 355368 TATGAAA-ATATATTTAGTTAATTGATTG 355395 | ||||| |||||| | | |||| || || Sbjct 751422 TGTGAAATATATATCTTGCTAATGGACTG 751394 Score = 87.8 bits (96), Expect = 1e-11 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 357388 ATATTAGCTAATTTAGAACCAAAACCATTTTTACCACCCACTGTTTTCTTTTCGTTTTTA 357447 |||||| |||||| | |||| | |||||| ||||||| | ||| | ||| | | | Sbjct 748676 ATATTACATAATTTGGCACCATAGCCATTTCTACCACCTGTTACTTTTTCTTCTTCATCA 748617 Query 357448 TCATAATTAGTTGATGTCAAAAGTTCTCCAAAAATCATAGATGGTACTAAAATTTTATGC 357507 |||||||||| |||||| || | | ||||| ||||| | || || | || || | | Sbjct 748616 TCATAATTAGATGATGTTAACAAATGGCCAAATATCATTGTAGGAACATACATATTTTCC 748557 Query 357508 TCTTTATGTTCAACCACATCAATACCATCACCATTATTCCAGACAG 357553 |||||||| ||||| ||| || | |||||||||||| |||| Sbjct 748556 TCTTTATGAATTACCACTGGAATGCCTTTACCATTATTCCATACAG 748511 Score = 86.0 bits (94), Expect = 4e-11 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 355401 TGTGAAGATATATCGTGCACTTGCATTATCTTTGCCTCCACTTAATCTTGTACCAAATTG 355460 |||||| || || || | ||| || ||| || ||||| | ||| ||||||||||| Sbjct 751117 TGTGAAAATGTAACGAGGACTCGCCGCATCCTTTCCTCCGGCGAGTCTCGTACCAAATTG 751058 Query 355461 ACCATTGGGAAGTAATAAATTTATGTTGTTACTTCCAACATAATTTTGTGCCATTTTTAT 355520 |||| | || ||| ||||||||| || |||||||| || |||||||||| | || || Sbjct 751057 ACCAATTGGTTGTAGTAAATTTATATTATTACTTCCTACGAAATTTTGTGCGAGATTAAT 750998 Query 355521 TATAGTTTCAGTCATTGACTGTTCTCCATGATGATAT 355557 || ||| | | || ||| |||||||||||| Sbjct 750997 GATGGTTGACATAAGAGAAACTTCGCCATGATGATAT 750961 >seq5 Length=11918102 Score = 113 bits (124), Expect = 3e-19 Identities = 130/173 (75%), Gaps = 4/173 (2%) Strand=Plus/Minus Query 299113 TGAAGAAGAGATTAAAAAAGCTTATAAAAAATTAGCTATGAAATATCATCCTGACAGAAA 299172 ||| || ||||| |||||||| || | ||| |||||| | || ||||||||||| | ||| Sbjct 6856713 TGACGATGAGATCAAAAAAGCCTACAGAAAGTTAGCTTTAAAGTATCATCCTGATAAAAA 6856654 Query 299173 TAAAAGTCCTGAAGCGGAAGAAAAGTTTaaaaaaaTAAGTCATGCTTAT--AGTATTCTT 299230 | ||| ||| || || || ||||| || ||||| | | |||||| |||| ||| Sbjct 6856653 CAGGAGTGCTGGGGCAGAGGAGAAGTTCAAGGAAATAGCTGAAGCTTATGAAGTA--CTT 6856596 Query 299231 TCAGATCCAACCAAAAAAGAAGTATATGATAAATTTGGAGAAGAAGGATTAAA 299283 || ||| | | || | ||||||||||| || |||||||| ||||||||||| Sbjct 6856595 TCTGATGCTAAAAAGAGGGAAGTATATGACAAGTTTGGAGAGGAAGGATTAAA 6856543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267938602775132