Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20terrestris_20[refseq_20GCF_5F000214255.1_202011-06-03] 5,609 sequences; 248,654,244 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq41 87.8 1e-12 >seq41 Length=919255 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGA--ATCTTCCAATT 101093 ||||| |||||||| ||||| ||||||||||| | | ||| | | ||||||||||| Sbjct 762332 TGCAAGGTTGATTCCTTTTGTATATTGTAATCAG--AAAGTGTGCGCCCATCTTCCAATT 762389 Query 101094 GTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTT 101153 |||| || || | || | ||| ||||||||| || | ||||| ||||| ||||| Sbjct 762390 GTTTACCAGCGAAGATCAACCTCTGTTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATTT 762449 Query 101154 TTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCG 101213 || |||||||| | | || || | | ||| | || || ||||| || | Sbjct 762450 TTGCTTTCACATTCTCAATAGTATCAGAAGCTTCAACTTCAAGAGTTATTGTTTTTCCTG 762509 Query 101214 TCAATGTTTTAATAAAAATTTGCATT 101239 | | ||||| | ||||||||||||| Sbjct 762510 TAAGGGTTTTTACAAAAATTTGCATT 762535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409632795715731