Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20terrestris_20[refseq_20GCF_5F000214255.1_202011-06-03] 5,609 sequences; 248,654,244 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq15 95.1 1e-14 >seq15 Length=11467329 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 4842 TACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCT 4901 |||||||| || || | ||||||||| || | ||||| || || || || | || || Sbjct 5182297 TACATTTCTGAGTGCACATTTTCTATGGCGACTTGAAAACCATAGAAACAACGTGCCTCG 5182238 Query 4902 GTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTG 4961 |||||||| ||||| | || ||||| ||| || | ||| || || || || || ||| Sbjct 5182237 GTTACTTGTACTTCTTGACTAAATCGTTCGACGAGGTTCTCATTAACGATTCCATCAGAA 5182178 Query 4962 GCTGCAAAAAACGCCAAAACATGAGATATAAA 4993 || ||||| || || || ||||||||||| || Sbjct 5182177 GCCGCAAAGAATGCTAAGACATGAGATATGAA 5182146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427020407022797