Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq118106 138 8e-28 >seq118106 Length=1339 Score = 138 bits (152), Expect = 8e-28 Identities = 169/227 (74%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 ||| |||||||||||||| || | |||||||| ||||| || ||||||||||| || Sbjct 756 AGTCACATGAGCAATCATATGTGTGAGCAGAGAATAACTAGCTATATTAAATGGCACCCC 697 Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATA 101871 ||| ||||| ||||| |||||| |||| || || | || |||||| ||||| Sbjct 696 TAAGCCCATGTCAGCACTTCTTTGGTACAACAAGCAAGATAATTTGCCATCAGCCACATA 637 Query 101872 AAATTGACTTAATACA-TGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCC 101930 |||||| ||| ||| ||||| || || | | ||||||| || ||||||| ||||| Sbjct 636 AAATTGTGCTAA-ACAGTGACATGGTGGTAGCGCCATTTTCTTAAGGTCTGAAGAATTCC 578 Query 101931 AAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTA 101977 | ||||| |||||||| ||||| |||| || ||||| |||| || Sbjct 577 ATGCACATATTAACATTCTTCTGTCTG-CTGGATTGTTCCTATAATA 532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358288532962163