Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq118106 123 2e-23 >seq118106 Length=1339 Score = 123 bits (136), Expect = 2e-23 Identities = 162/219 (74%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 97112 AATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCA 97171 || |||| ||||| || |||||| || | |||||||| ||||| || ||||| |||| Sbjct 760 AACCAGTCACATGAGCAATCATATGTGTGAGCAGAGAATAACTAGCTATATTAAATGGCA 701 Query 97172 CCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACA 97231 |||||| ||||| ||||| |||||| || ||| || || | || |||||| || Sbjct 700 CCCCTAAGCCCATGTCAGCACTTCTTTGGTACAACAAGCAAGATAATTTGCCATCAGCCA 641 Query 97232 CATAAAACTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCT-AAGAC 97289 ||||||| || || ||| ||||| || || | ||||||||| || ||| |||| Sbjct 640 CATAAAATTGTGCTAA-ACAGTGACATGGTGGTAGCGCCATTTTCTTAAGGTCTGAAGA- 583 Query 97290 ATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTT 97328 |||||| ||||| || ||||||||||| || | ||| || Sbjct 582 ATTCCATGCACATATTAACATTCTTCTGTCTGCTGGATT 544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 343939980309410