Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq26808 120 5e-22 seq608441 109 8e-19 >seq26808 Length=8541 Score = 120 bits (132), Expect = 5e-22 Identities = 173/244 (71%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 124533 AATACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAA 124592 || |||||||| ||||| | || || || || || || || || || | ||| | ||| Sbjct 7376 AACACAATGCAGATATTCGTCAAAACCCTTACGGGGAAGACCATTACATTGGAGGTGGAA 7435 Query 124593 GCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCT 124652 || || || || ||| | ||| ||||||||||| || |||||||| || || Sbjct 7436 GCTTCCGACACTATCGAAAATGTCAAAGCTAAAATTCAAGACAAGGAAGGTATTCCGCCA 7495 Query 124653 GATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGAT 124712 || |||||| | || || ||||| || ||||||||||| ||| | || || | ||| Sbjct 7496 GACCAACAACGTCTCATCTTTGCCGGTAAACAATTAGAAGATGGCCGCACTCTTTCAGAC 7555 Query 124713 TATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAA 124772 |||||||| || |||||||| || | ||||| ||||| | | |||| |||| || | Sbjct 7556 TATAATATCCAGAAAGAATCCACACTTCATTTAGTTTTGAGACTTAGAGGAGGTAATATA 7615 Query 124773 AATT 124776 |||| Sbjct 7616 AATT 7619 >seq608441 Length=509 Score = 109 bits (120), Expect = 8e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 || ||||| || ||| | || || || || || ||||| ||||| |||| | ||||| Sbjct 305 ACCATGCAGATTTTTGTTAAAACTCTCACTGGTAAAACCATAACATTAGAAGTCGAAGCC 364 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 |||||| || ||| ||||| ||||||||||| ||||| || || || || ||| Sbjct 365 TCTGATACCATAGAAAATGTAAAAGCAAAAATTCAAGACAAAGAGGGCATTCCTCCAGAT 424 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 || || | || ||||| || || |||||| | || || | || |||||| ||||| Sbjct 425 CAGCAGCGACTGATTTTCGCTGGGAAACAACTTGAAGACGGACGTACATTATCCGATTAC 484 Query 124716 AATATTCAAAAAGAATCAACTTTGC 124740 || || || |||||||| ||| ||| Sbjct 485 AACATCCAGAAAGAATCGACTCTGC 509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 749101547958400