Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq51755 203 3e-47 >seq51755 Length=2487 Score = 203 bits (224), Expect = 3e-47 Identities = 346/494 (70%), Gaps = 6/494 (1%) Strand=Plus/Minus Query 20806 GGGTTCGCGCCATTGCCGCCCGGAAACTCCCAATCAATGTCGACGCCATCAAAGAATTTC 20865 ||||| ||||| |||||||| || |||||||||||||| ||||| ||||| ||||| ||| Sbjct 1481 GGGTTAGCGCCTTTGCCGCCAGGGAACTCCCAATCAATATCGACACCATCGAAGAACTTC 1422 Query 20866 CACGTTTCTAGATACTCTTGGACCGAATCGA-TAAACGTTTGGCGCACGATCTTGTC-GT 20923 || |||| || | |||| || || | | ||||| | ||| | | || || || Sbjct 1421 CAGGTTTGGAGGAAGTCTTTCACGGAGCCAACGAAACG-GTCACGCTTGGTTTTATCGGT 1363 Query 20924 GCATATGGAAAAATGGGTCCGAAAGTGTCCAGCCCCCGATAGACGGTAACACTTTGAGAT 20983 | | | ||| || || || | | ||||||||| || || || ||||| | || | | Sbjct 1362 GAAGA-AGAAGAAGGGATCGGCCAATGTCCAGCCACCAATCGAAGGTAAGATCTTTAAAC 1304 Query 20984 GCGGGTTCGCCAATTTCGCGGCCATAAGTTGGCCAAAGTTGCCTTTGTACGGTTCGTTCC 21043 | ||||| |||| ||| || || || ||||| |||||||| || ||||||| Sbjct 1303 CAGTATTCGCTTGTTTCAACTGCATCAGCTGCCCGAAGTTACCTTTGTAGGGCTCGTTCC 1244 Query 21044 ATG-CGCTGACACCTTTCTGGGGTTTCTGTATGGCCGCCCACGGATCGTGAATGGCCACC 21102 | | || | | ||||| || || ||||| | ||||||||| |||||||| || | ||| Sbjct 1243 AGGACGATAATCCCTTT-TGAGGCTTCTGCAGGGCCGCCCAGGGATCGTGGATAGAAACC 1185 Query 21103 TTAAAGTCGGCACGGCCCGCGCACGAACGTTGCAACGCTTCGAAACTGCCCGGGACACTT 21162 || ||||| ||||||| ||| ||||| ||||| |||| |||||||| | | Sbjct 1184 TTGAAGTCTTCACGGCCGCTGCATGAACGCTGCAATGCTTGAAAACTGCCTTCAATTTCT 1125 Query 21163 TTGAGCGCATCGTTGATGCCTTCGCCTCCGCACATGGGCACGAAACCGTACAACAAATGC 21222 || | || |||||||| || || || || || || | ||| ||||| | |||||| Sbjct 1124 TTCAAACTGTCATTGATGCCATCACCACCACAAATCGGGATGAAGCCGTAAAGCAAATGA 1065 Query 21223 GACAAGTTCGGTGTGGGCACTTTATCGACGGGAAACTGGCGCGGATACACACCCCATTCG 21282 | || |||||| || | || ||||| |||| | |||||||| ||||||||| Sbjct 1064 GTCAGGTTCGGAACCGGGATGCGGTCCACGGGGAACTTTCTAGGATACACGCCCCATTCG 1005 Query 21283 ACAAAGTATGCTCC 21296 || ||||| || || Sbjct 1004 ACGAAGTAGGCGCC 991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 491891401069600