Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq601675 113 4e-20 seq304119 82.4 7e-11 >seq601675 Length=487 Score = 113 bits (124), Expect = 4e-20 Identities = 157/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201 ||||||||||| ||||| | | |||||||||||| || | |||||||| |||||||| Sbjct 372 ATGTATGTATCTATAAGAAGGGAATACATTTCAGAATGAACATTTTCCATGGCTATCTGG 313 Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAA 14261 || ||||| || ||||| || || | | ||| ||||| ||||||| || | || Sbjct 312 AAGCCATAGAAACATCTTGCCTCAGTCACTTGAACTTCTTGTGAAAATCTCTCAACTAAG 253 Query 14262 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14321 |||||||| || || || || ||| ||||| ||||| | | | || || |||| | Sbjct 252 TTTTCATTTACAATGCCGTCGGAAGCCGCAAAGAATGCAAGAACATGCTTGATGAAGTGT 193 Query 14322 TGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCT 14361 ||| || || || ||| ||| || |||||||||| Sbjct 192 CTCTCACTATCTTTTAGGGTTTCCCAGTCTGATAAATCCT 153 >seq304119 Length=206 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 13698 AGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATT 13757 ||||||||||| || | |||||| || || ||||||||||| ||||| ||||| || | Sbjct 2 AGTAATCTATCTGCGACAAACTCTATGTACTGAGACATTAATTCACAGTTCATCCCAAGC 61 Query 13758 AGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATA 13817 ||| ||||||| | || || | ||| |||| ||| || |||||| ||||| || Sbjct 62 AGTCTTACAGGGAGCGCATCCGTGAGAAACTCTTGTTCAATGACCACAGCATCTTTGATG 121 Query 13818 ATA 13820 ||| Sbjct 122 ATA 124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475692809904200