Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq601675 113 4e-20 >seq601675 Length=487 Score = 113 bits (124), Expect = 4e-20 Identities = 157/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989 ||||||||||| ||||| | | |||||||||||| || | ||||| || |||||||| Sbjct 372 ATGTATGTATCTATAAGAAGGGAATACATTTCAGAATGAACATTTTCCATGGCTATCTGG 313 Query 13990 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAG 14049 || ||||| |||||||| || || | | ||| || || ||||||| || | ||| Sbjct 312 AAGCCATAGAAACATCTTGCCTCAGTCACTTGAACTTCTTGTGAAAATCTCTCAACTAAG 253 Query 14050 TTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14109 |||||||| ||||| || || ||| ||||| ||||| | | | || || |||| | Sbjct 252 TTTTCATTTACAATGCCGTCGGAAGCCGCAAAGAATGCAAGAACATGCTTGATGAAGTGT 193 Query 14110 TGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCT 14149 ||| || || || ||| ||| || | |||||||| Sbjct 192 CTCTCACTATCTTTTAGGGTTTCCCAGTCTGATAAATCCT 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474563192185320