Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq118106 149 9e-31 seq610703 113 7e-20 >seq118106 Length=1339 Score = 149 bits (164), Expect = 9e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 70189 GACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCA 70248 || ||||||| |||| || || || |||| || |||||||| || |||| | | | Sbjct 540 GAACAATCCAGCAGACAGAAGAATGTTAATATGTGCATGGAATTCTTCAGACCTTAAGAA 599 Query 70249 AATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATTGTC 70308 |||||| |||||||| ||||||||||| || || ||||| | ||||||||||| || Sbjct 600 AATGGCGCTACCACCATGTCACTGTTTAGCACAATTTTATGTGGCTGATGGCAAATTATC 659 Query 70309 ATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAG 70368 ||||| |||| || || ||||| ||||||||| | || || || ||||| || || || Sbjct 660 TTGCTTGTTGTACCAAAGAAGTGCTGACATGGGCTTAGGGGTGCCATTTAATATAGCTAG 719 Query 70369 CTATTCTATGTTGACGCACATGATTGCTCA 70398 |||||| || | || || ||||||||||| Sbjct 720 TTATTCTCTGCTCACACATATGATTGCTCA 749 >seq610703 Length=516 Score = 113 bits (124), Expect = 7e-20 Identities = 122/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 126747 ACCGAGTCTGATGCCGCTTGGTCTGAGAGCGCTCTTGTCTCCGGGTACTGTGTTTTTGTT 126806 |||||| ||||||||||| || |||| ||||| |||| ||||| || ||||| ||||| Sbjct 172 ACCGAGCCTGATGCCGCTAGGGTTGAGCGCGCTGATGTCGCCGGGCACGGTGTTCTTGTT 231 Query 126807 GCAAGCGATTCTGCACAGTTCGAGGATGCGCTCTGCCGGTGCTCCTGCGAGTCCCACACT 126866 ||| || | || || || ||||| | |||||| ||||| || || || ||||| | Sbjct 232 GCAGGCCACGCTACAGAGCTCGAGCACGCGCTCGGCCGGCGCGCCCCGCAGCCCCACGCC 291 Query 126867 GCGCAAATCCACTAGAATCAGATGCACATCGGTACCGCCAGT 126908 |||||| ||||| || || ||||| ||||| ||||| || Sbjct 292 GCGCAAGTCCACGAGCGCGAGGTGCACGTCGGTGCCGCCCGT 333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 734825845381880