Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq608441 100 2e-16 >seq608441 Length=509 Score = 100 bits (110), Expect = 2e-16 Identities = 156/217 (72%), Gaps = 7/217 (3%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 || || || ||||||||||| | ||| || |||| || || || || || || || Sbjct 498 TCTTTCTGGATGTTGTAATCGGATAATGTACGTCCGTCTTCAAGTTGTTTCCCAGCGAAA 439 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTG-ATAGA 48654 || | ||||||||||| || | | || ||||| |||||| ||||| | | Sbjct 438 ATCAGTCGCTGCTGATCTGGAGGAATGCCCTCTTTGTCTTGAATTTT-TGCTTTTACATT 380 Query 48655 CGCTATGGTATCGGTAGACTCCGTCT-CGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 |||||||||| | || || || || | | ||||||||||||||| ||||||||||| | Sbjct 379 TTCTATGGTATCAG-AGGCTTCGACTTCTAATGTTATGGTTTTACCAGTGAGAGTTTTAA 321 Query 48714 CAAAAATCTGCATCGTG---TCTTGATCGAAGAAAGA 48747 ||||||||||||| ||| ||| || | ||||| || Sbjct 320 CAAAAATCTGCATGGTGGTTTCTAGAACAAAGAAGGA 284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417796465330913