Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq608441 107 2e-18 seq26808 107 2e-18 >seq608441 Length=509 Score = 107 bits (118), Expect = 2e-18 Identities = 148/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 94806 GCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTG 94863 ||| ||| ||||| || || | ||| |||||| ||| ||| | || || || || Sbjct 509 GCAGAGTCGATTCTTTCTGGATGTTGTAATCGG--ATAATGTACGTCCGTCTTCAAGTTG 452 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 ||| || | || || | || ||||||||||||||||| || |||||||| | |||||| Sbjct 451 TTTCCCAGCGAAAATCAGTCGCTGCTGATCTGGAGGAATGCCCTCTTTGTCTTGAATTTT 392 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 ||| || || | | || |||| | ||||| || | || |||||||| ||||| Sbjct 391 TGCTTTTACATTTTCTATGGTATCAGAGGCTTCGACTTCTAATGTTATGGTTTTACCAGT 332 Query 94984 AAGAGTTTTCACAAAGATCTGCATG 95008 |||||||| ||||| ||||||||| Sbjct 331 GAGAGTTTTAACAAAAATCTGCATG 307 >seq26808 Length=8541 Score = 107 bits (118), Expect = 2e-18 Identities = 171/243 (70%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 94766 TTAAAATTTTACACT-CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTG 94824 ||||||||| | | | |||||||| | || ||| || || || | || ||||| || || Sbjct 7623 TTAAAATTT-ATATTACCTCCTCTAAGTCTCAAAACTAAATGAAGTGTGGATTCTTTCTG 7565 Query 94825 CACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCT 94884 | ||||| || | |||| | ||| || | ||||| ||| ||||||| | | Sbjct 7564 GATATTATAGTCTGAAAGAGTGCGGCCATCTTCTAATTGTTTACCGGCAAAGATGAGACG 7505 Query 94885 TTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGT 94944 ||| || ||||| ||||||||||| ||||| | |||||| || ||||| ||| ||| Sbjct 7504 TTGTTGGTCTGGCGGAATACCTTCCTTGTCTTGAATTTTAGCTTTGACATTTTCGATAGT 7445 Query 94945 GTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTG 95004 ||| | || || || | || ||||| || || ||||| ||||| || || ||||| Sbjct 7444 GTCGGAAGCTTCCACCTCCAATGTAATGGTCTTCCCCGTAAGGGTTTTGACGAATATCTG 7385 Query 95005 CAT 95007 ||| Sbjct 7384 CAT 7382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444520437796680