Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq51755 230 2e-55 seq255931 113 4e-20 >seq51755 Length=2487 Score = 230 bits (254), Expect = 2e-55 Identities = 737/1125 (66%), Gaps = 25/1125 (2%) Strand=Plus/Plus Query 55681 AGCTATGCAACTCGGACGGATGCACTTCGAGTCAAGCGGTCGAAGTTGTAATCGCAGATA 55740 |||| |||||||| |||||||||| || || | | || ||| | ||| | || |||| Sbjct 848 AGCTCTGCAACTCAGACGGATGCAGCTCCAGCGAGGGTGTAGAAATCGTAGTAGCTGATA 907 Query 55741 CGGACGGTTCTCATCTTGCTCCGCTCTATTACGAATATCAGGAATTAAATCAACCTTTCG 55800 | || ||| ||| | | ||| |||| | | || |||| |||| ||| Sbjct 908 CTGATGGTAGCCATTTGAGGCTTCTCGATTATTCAATTGGTGAGAAAAATAAACCCTTC- 966 Query 55801 AAACGCGAGTCGTGGATAAAATCGTTGCCGCATATTTTGTCGAGTGGGGTGTTTATCATA 55860 || || | ||| ||| | || | ||| || || ||||| ||||| || |||| || Sbjct 967 -AAGCAGACTTCGGGA-AAAGTTGTGGGCGCCTACTTCGTCGAATGGGGCGTGTATCCTA 1024 Query 55861 GAAACTTTCCTGTCACTCGAGTTCCCACTCCTAATCTGTCACACATTCTCTACGGATTCA 55920 |||| || || || || | || ||| || ||| | || | || ||||| |||| Sbjct 1025 GAAAGTTCCCCGTGGACCGCATCCCGGTTCCGAACCTGACTCATTTGCTTTACGGCTTCA 1084 Query 55921 TACCGATATGCGGCGGCGACGGCATTAACGACAGTCTCAAGACGATAACCGGTAGTTTTG 55980 | ||||| || || || || ||||| || |||||| | || || || |||||| Sbjct 1085 TCCCGATTTGTGGTGGTGATGGCATCAATGACAGTTTGAAAGAAATTGAAGGCAGTTTTC 1144 Query 55981 AAGCGCTTCAGCGATCGTGTTCGGGTCGAGACGACTTCAAAGTGTCGATTCATGACCCGT 56040 |||| | ||||| || || || || || |||||||| || || || || || || | Sbjct 1145 AAGCATTGCAGCGTTCATGCAGCGGCCGTGAAGACTTCAAGGTTTCTATCCACGATCCCT 1204 Query 56041 GGGCTGCGGTCCAAAAGCCCCAAAAACAAGTGACCGCATGGAACGAACCATACAAAGGCA 56100 |||| || | || ||||| ||||| | | | | |||||||| || |||||||| | Sbjct 1205 GGGCGGCCCTGCAGAAGCCTCAAAAGGGATTATCGTCCTGGAACGAGCCCTACAAAGGTA 1264 Query 56101 ACTTTGGACAATTGATGGCAGCT-AAACTGGCGAATCCCCATGTTAAAGTGCTG-CCTTC 56158 |||| || || ||||| ||| | |||| |||||| | | |||||| || ||||| Sbjct 1265 ACTTCGGGCAGCTGATG-CAGTTGAAACAAGCGAATACTGGT-TTAAAGATCTTACCTTC 1322 Query 56159 GATCGGTGGCTGGACTTTATCCGATCCGTTCTTTTACTTTCACGATGCGGTCAAACGCAA 56218 ||| ||||||||||| || ||||||| ||||| | ||| |||| ||| || | Sbjct 1323 GATTGGTGGCTGGACATTGGCCGATCCCTTCTTCTTCTTCACCGATAAAACCAAGCGTGA 1382 Query 56219 AATTTTTGTCGATTCTGTCGTCGAGTTTTTACAGACCTGGAAATTTTTCGATGGTGTCGA 56278 ||| || | || || || || | || |||||||| || |||||||||||||| Sbjct 1383 CCGTTTCGTTGGCTCCGTGAAAGACTTCCTCCAAACCTGGAAGTTCTTCGATGGTGTCGA 1442 Query 56279 CATCGACTGGGAGTTTCCCGGCGGAAAGGGGGCCAATTCCAACGTCGGCGATGCCGAACG 56338 || || |||||||| || ||||| || || || || | || |||| | | | || Sbjct 1443 TATTGATTGGGAGTTCCCTGGCGGCAAAGGCGCTAACCCTGACCTCGGTGGTCCTAAAGA 1502 Query 56339 CGATCGCAACACGTACACGATTCTG-TTACG--AGATTTACGCGAAGCGCTAGACCGACT 56395 || | | ||| ||| ||| | | | | ||| ||||| || | | || || Sbjct 1503 CG-----GAGATGTATACG-TTCAGCTCATGAAAGAATTACGTCAAATGTTGGATGAGCT 1556 Query 56396 -AAGCCTCGAAACGAATCGAACATACGAGCTAACCAGCGCCATTAGCGCCGGCGATGACA 56454 | || || || | |||| |||||||| ||| ||||| || ||||| |||| Sbjct 1557 GGCGGCT-GAGACTGGTAGAACTTACGAGCTGACCTCTGCCATCAGTGCCGGTTGGGACA 1615 Query 56455 AAATCACGGTCGTCGACTACACAGCCGCTCAAAAATATTTAGATTATAtttttttGATGA 56514 | ||| || || |||||| | || || || || | ||| ||||||| | |||| Sbjct 1616 AGATCCAAGTTGTGAACTACAAGGAAGCCCAGAAGTACATGGATCATATTTTCGTCATGA 1675 Query 56515 CATACGATTTTAAAGGCGCTTGGTCGAATAGCGATCTGGGCTATCAGACGACTTTGTACG 56574 ||||| || || || || ||||| || | ||| || ||||||| || | |||| Sbjct 1676 GTTACGACTTCAAGGGTGCCTGGTCTAACGACACTCTCGGACATCAGACCGCTCTATACG 1735 Query 56575 CGCCTGCGTTTAATCCTAAAGAACACTATACGACCGATTTTGCGGT-TC-GTGCTCTGCT 56632 | || | | | ||| || ||| || || ||||| || |||| || | |||||| Sbjct 1736 CTCCGTCTTGGAGTCCAAAGGAAACTTACACCACCGACTT--CGGTATCAGGTATCTGCT 1793 Query 56633 TAAACAAAAAGTCGAGAATAAAAAGATTGTAGTCGGCGTAGCTATGTACGGTCGCGGGTG 56692 | ||| || | |||||| | || ||||| || ||||||||||| || || || Sbjct 1794 GACCCAAGGTGTTCCGCCCAAAAAGCTGGTTGTCGGTGTTGCTATGTACGGACGTGGCTG 1853 Query 56693 GACCGGCGTCGGTGATTTCGTCGACAAAAACAATCCATTTTCCGGCACGGCCAAGGGACC 56752 ||| || || ||| | | ||| ||| || || |||| || || || || Sbjct 1854 GACAGGAGTTCATGACTACAATGAC---GACATACCGTTCACCGGAGTAGCTAATGGCCC 1910 Query 56753 TGTCAAAGGTACCTGGGAAGACGGAGTCGTTGATTTTAGAGAAAT 56797 || || || || ||| | ||||| || || |||| ||| || || Sbjct 1911 AGTTAAGGGAACTTGGCAGGACGGCGTGGTGGATTATAGGGAGAT 1955 >seq255931 Length=537 Score = 113 bits (124), Expect = 4e-20 Identities = 353/535 (66%), Gaps = 19/535 (4%) Strand=Plus/Plus Query 56088 CCATACAAAGGCAACTTTGGACAATTGATGGCAGCT-AAACTGGCGAATCCCCATG--TT 56144 || |||||||| ||||| || || ||||| ||| | |||| |||||| | || || Sbjct 3 CCCTACAAAGGTAACTTCGGGCAGCTGATG-CAGTTGAAACAAGCGAATAC---TGGCTT 58 Query 56145 AAAGTGCTG-CCTTCGATCGGTGGCTGGACTTTATCCGATCCGTTCTTTTACTTTCACGA 56203 |||| || |||||||| ||||||||||| || ||||||| ||||| | ||| ||| Sbjct 59 AAAGATCTTACCTTCGATTGGTGGCTGGACATTGGCCGATCCCTTCTTCTTCTTCACCGA 118 Query 56204 TGCGGTCAAACGCAAAATTTTTGTCGATTCTGTCGTCGAGTTTTTACAGACCTGGAAATT 56263 | ||| || | ||| || | || || || || | || |||||||| || Sbjct 119 TAAAACCAAGCGTGATCGTTTCGTTGCCTCCGTGAAAGACTTCCTCCAAACCTGGAAGTT 178 Query 56264 TTTCGATGGTGTCGACATCGACTGGGAGTTTCCCGGCGGAAAGGGGGCCAATTCCAACGT 56323 |||||||||||||| || ||||||||||| || ||||| || || || || | || | Sbjct 179 CTTCGATGGTGTCGATATTGACTGGGAGTTCCCTGGCGGCAAAGGCGCTAACCCTGACCT 238 Query 56324 CGGCGATGCCGAACGCGATCGCAACACGTACACGATTCTG-TTACGA--GATTTACGCGA 56380 ||| | | | || || | | ||| ||| ||| | | | || || ||||| | Sbjct 239 CGGTGGTCCTAAAGACG-----GAGATGTATACG-TTCAGCTCATGAAGGAATTACGTCA 292 Query 56381 AGCGCTAGACCGACT-AAGCCTCGAAACGAATCGAACATACGAGCTAACCAGCGCCATTA 56439 | | | || || | || || || | |||| |||||||| ||| ||||| | Sbjct 293 AATGTTGGATGAGCTGGCGGCT-GAGACTGGTAGAACTTACGAGCTGACCTCTGCCATCA 351 Query 56440 GCGCCGGCGATGACAAAATCACGGTCGTCGACTACACAGCCGCTCAAAAATATTTAGATT 56499 ||||||| ||||| ||| || || |||||| | || || || || | || Sbjct 352 GCGCCGGTTGGGACAAGATCCAAGTTGTGAACTACAAGGAAGCCCAGAAGTACATGGACC 411 Query 56500 ATAtttttttGATGACATACGATTTTAAAGGCGCTTGGTCGAATAGCGATCTGGGCTATC 56559 ||||||| | |||| ||||| || || || || ||||| || | ||| || | | Sbjct 412 ATATTTTCGTCATGAGTTACGACTTCAAGGGTGCCTGGTCTAACGACACTCTCGGACACC 471 Query 56560 AGACGACTTTGTACGCGCCTGCGTTTAATCCTAAAGAACACTATACGACCGATTT 56614 |||| || ||||||| || | | | ||| || ||| || || ||||| || Sbjct 472 AGACCGCTCTGTACGCTCCGTCTTGGAGTCCAAAGGAAACTTACACCACCGACTT 526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426410040181515