Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq51755 224 8e-54 seq255931 129 5e-25 seq462883 113 4e-20 seq617918 98.7 8e-16 seq26808 87.8 2e-12 >seq51755 Length=2487 Score = 224 bits (248), Expect = 8e-54 Identities = 527/790 (67%), Gaps = 19/790 (2%) Strand=Plus/Plus Query 32177 GCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGACAAAGTGCCGTTG 32236 || || || || |||||||||||||| | || ||||| | ||| | ||| | Sbjct 994 GCCTACTTCGTCGAATGGGGCGTGTATCCTAGAAAGTTCCCCGTGGACCGCATCCCGGTT 1053 Query 32237 CCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGGACTAAAC 32296 || || || | ||| || | ||||| || || || ||||| || || || || | || Sbjct 1054 CCGAACCTGACTCATTTGCTTTACGGCTTCATCCCGATTTGTGGTGGTGATGGCATCAAT 1113 Query 32297 GATGCCCTCAAAACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAAGGCCGC 32356 || | ||| || ||||||||| | || |||| ||||| |||| ||||| Sbjct 1114 GACAGTTTGAAAGAAATTGAAGGCAGTTTTCAAGCATTGCAGCGTTCATGCAGCGGCCGT 1173 Query 32357 GCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCAGAAGGGC 32416 | |||||| |||||| | || ||||| || ||||| || | || || || || ||||| Sbjct 1174 GAAGACTTCAAGGTTTCTATCCACGATCCCTGGGCGGCCCTGCAGAAGCCTCAAAAGGGA 1233 Query 32417 GTGTCTGCGTGGAACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCGGCCAAGTTG 32476 | || | |||||||| ||||||||||| ||||| || || ||||| | || Sbjct 1234 TTATCGTCCTGGAACGAGCCCTACAAAGGTAACTTCGGGCAGCTGATGCAGTTGAAACAA 1293 Query 32477 GCAAACCCTCACATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCGGATCCCTTT 32536 || || || |||| || ||||| || ||||| || ||||| ||| | |||||||| Sbjct 1294 GCGAATACTGGTTTAAAGATCTTACCTTCGATTGGTGGCTGGACATTGGCCGATCCCTTC 1353 Query 32537 TATTTTATGCACGACGCGGAAAAACGGCACGTG-----TTTGTCGATTCCGTCAAAGAGT 32591 | | || | ||| || ||||| |||| || || | ||||| ||||| | Sbjct 1354 T-TCTTCTTCAC----CGATAAAACCAAGCGTGACCGTTTCGTTGGCTCCGTGAAAGACT 1408 Query 32592 TTTTACAGGTTTGGAAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCGGCA 32651 | | || ||||| ||||| || || || || ||||||||||||||||| ||||||| Sbjct 1409 TCCTCCAAACCTGGAAGTTCTTCGATGGTGTCGATATTGATTGGGAGTTCCCTGGCGGCA 1468 Query 32652 AAGGTGCCAACCCGGCGCTCGGTAACGGGGAGCGCGACGCGCACACG--TACATTATTTT 32709 |||| || ||||| | |||||| || | | || | | | ||| || | Sbjct 1469 AAGGCGCTAACCCTGACCTCGGT-----GGTCCTAAAGACGGAGATGTATACGTTCAGCT 1523 Query 32710 GTTACAAGAATTGCGTTCTATGCTGGACGACCT-TCAATTGCAAACGGGCAAAACGTACG 32768 | ||||||| ||| ||| |||| || || | || | || || | ||| |||| Sbjct 1524 CATGAAAGAATTACGTCAAATGTTGGATGAGCTGGCGGCTG-AGACTGGTAGAACTTACG 1582 Query 32769 AGTTGACTAGCGCAATTAGTGCCGGCCACGACAAAATTGCTGTGGTGCAATATGAAGCCG 32828 || |||| || || |||||||| ||||| || || ||| | || | | | Sbjct 1583 AGCTGACCTCTGCCATCAGTGCCGGTTGGGACAAGATCCAAGTTGTGAACTACAAGGAAG 1642 Query 32829 CGCAAAAGTACCTCGATAAAATATTTCTCATGAGTTACGACTTTAAAGGGGCATGGTCTA 32888 | || |||||| | ||| | || || |||||||||||||||| || || || ||||||| Sbjct 1643 CCCAGAAGTACATGGATCATATTTTCGTCATGAGTTACGACTTCAAGGGTGCCTGGTCTA 1702 Query 32889 ACACCGATTTGGGCTATCAGACCACTTTGTACGCTCCAAGTTGGAATCCCGATGAATTGT 32948 || | | | || |||||||| || | |||||||| ||||| ||| | ||| | Sbjct 1703 ACGACACTCTCGGACATCAGACCGCTCTATACGCTCCGTCTTGGAGTCCAAAGGAAACTT 1762 Query 32949 ACACCACAGA 32958 ||||||| || Sbjct 1763 ACACCACCGA 1772 >seq255931 Length=537 Score = 129 bits (142), Expect = 5e-25 Identities = 352/532 (66%), Gaps = 19/532 (4%) Strand=Plus/Plus Query 32435 CCCTACAAAGGCAACTTTGGCCAATTGATGGCGGCCAAGTTGGCAAACCCTCACATAAAA 32494 ||||||||||| ||||| || || ||||| | || || || || | |||| Sbjct 3 CCCTACAAAGGTAACTTCGGGCAGCTGATGCAGTTGAAACAAGCGAATACTGGCTTAAAG 62 Query 32495 ATTTTACCATCTATTGGCGGGTGGACGTTGTCGGATCCCTTTTATTTTATGCACGACGCG 32554 || ||||| || ||||| || ||||| ||| | |||||||| | | || | ||| || Sbjct 63 ATCTTACCTTCGATTGGTGGCTGGACATTGGCCGATCCCTTCT-TCTTCTTCAC----CG 117 Query 32555 GAAAAACGGCACGTGTTTGT--CGAT---TCCGTCAAAGAGTTTTTACAGGTTTGGAAAT 32609 ||||| |||| | || || | ||||| ||||| || | || ||||| | Sbjct 118 ATAAAACCAAGCGTGATCGTTTCGTTGCCTCCGTGAAAGACTTCCTCCAAACCTGGAAGT 177 Query 32610 TCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCGGCAAAGGTGCCAACCCGGCGC 32669 |||| || || || || ||||| ||||||||||| ||||||||||| || ||||| | | Sbjct 178 TCTTCGATGGTGTCGATATTGACTGGGAGTTCCCTGGCGGCAAAGGCGCTAACCCTGACC 237 Query 32670 TCGGTAACGGGGAGCGCGACGCGCACACG--TACATTATTTTGTTACAAGAATTGCGTTC 32727 ||||| || | | || | | | ||| || | | | ||||| ||| Sbjct 238 TCGGT-----GGTCCTAAAGACGGAGATGTATACGTTCAGCTCATGAAGGAATTACGTCA 292 Query 32728 TATGCTGGACGACCT-TCAATTGCAAACGGGCAAAACGTACGAGTTGACTAGCGCAATTA 32786 ||| |||| || || | || | || || | ||| |||||| |||| || || | Sbjct 293 AATGTTGGATGAGCTGGCGGCTG-AGACTGGTAGAACTTACGAGCTGACCTCTGCCATCA 351 Query 32787 GTGCCGGCCACGACAAAATTGCTGTGGTGCAATATGAAGCCGCGCAAAAGTACCTCGATA 32846 | ||||| ||||| || || ||| | || | | || || |||||| | || Sbjct 352 GCGCCGGTTGGGACAAGATCCAAGTTGTGAACTACAAGGAAGCCCAGAAGTACATGGACC 411 Query 32847 AAATATTTCTCATGAGTTACGACTTTAAAGGGGCATGGTCTAACACCGATTTGGGCTATC 32906 | || || |||||||||||||||| || || || ||||||||| | | | || | | Sbjct 412 ATATTTTCGTCATGAGTTACGACTTCAAGGGTGCCTGGTCTAACGACACTCTCGGACACC 471 Query 32907 AGACCACTTTGTACGCTCCAAGTTGGAATCCCGATGAATTGTACACCACAGA 32958 ||||| || |||||||||| ||||| ||| | ||| |||||||| || Sbjct 472 AGACCGCTCTGTACGCTCCGTCTTGGAGTCCAAAGGAAACTTACACCACCGA 523 >seq462883 Length=292 Score = 113 bits (124), Expect = 4e-20 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 109294 CAGCAACCCGATAAACTAGCCGAGGCCGGGTTTTATTACACGGGCCAGGGCGATAAAACC 109353 ||| ||||||| || | || |||||||| |||| || || ||||| || || ||||| Sbjct 107 CAGAAACCCGAGGAATTGGCGGAGGCCGGATTTTTCTATACAGGCCAAGGTGACAAAACT 166 Query 109354 AAATGTTTTTATTGTGACGGCGGTTTGAAAGACTGGGAGGCGGACGATGAGCCGTGGAAA 109413 ||||| || ||||||||||| || | ||||| ||||| || || | |||||| || Sbjct 167 AAATGCTTCTATTGTGACGGAGGGCTAAAAGATTGGGAAAGTGATGACGTTCCGTGGGAA 226 Query 109414 CTGCACGCGCGTTGGTTTGACCGTTGCCCTTACGTGTTGCTTGTTAAGGGTCGAGATTAT 109473 | |||||| | ||||| ||||||||| | |||||| || || || || || || ||| Sbjct 227 CAGCACGCTAGATGGTTCGACCGTTGCGCATACGTGCAACTGGTGAAAGGACGTGACTAT 286 >seq617918 Length=543 Score = 98.7 bits (108), Expect = 8e-16 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 109006 TGGCCGGTGTCGTATTTGGAACCGGAACGAATGGCCGCCAGCGGATTTTATTATTTGGGT 109065 ||||| || ||| |||| |||||| | | ||||| || |||||| || || | ||| Sbjct 306 TGGCCCGTTACGTTTTTGACACCGGAGCAATTGGCCCGCAACGGATTCTACTACCTCGGT 365 Query 109066 CGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAAATAATGCGTTGGCTTGAGGGT 109125 ||||||||||| || |||| || || || || || ||||| ||| | ||| | ||||| Sbjct 366 CGCGGCGACGAGGTTTGCTGTGCTTTCTGTAAGGTAGAAATCATGAGGTGGGTCGAGGGC 425 Query 109126 GACGACCCAGCGGTTGACCATAAAAGATTAGCGCCACAGTGTCCGTT 109172 |||||||| || | |||||| || | || || |||||||| || Sbjct 426 GACGACCCTGCTGCCGACCATCGGAGGTGGGCCCCCCAGTGTCCCTT 472 >seq26808 Length=8541 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || || |||||||| || ||||| || |||||||| | || ||| | Sbjct 7381 AATGCAGATATTCGTCAAAACCCTTACGGGGAAGACCATTACATTGGAGGTGGAAGCTTC 7440 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||||| | | | | || ||| |||||| || || ||||| | || || || Sbjct 7441 CGACACTATCGAAAATGTCAAAGCTAAAATTCAAGACAAGGAAGGTATTCCGCCAGACCA 7500 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | || || | ||| || |||||||||||||||| | || | | || ||||| Sbjct 7501 ACAACGTCTCATCTTTGCCGGTAAACAATTAGAAGATGGCCGCACTCTTTCAGACTATAA 7560 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 || || ||||| || || | ||| | || |||||| | ||||||| || Sbjct 7561 TATCCAGAAAGAATCCACACTTCATTTAGTTTTGAGACTTAGAGGAGGTAA 7611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421855699757560