Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq601675 176 5e-39 seq562919 150 2e-31 seq153916 136 4e-27 seq221910 132 5e-26 seq201923 127 2e-24 seq287045 105 7e-18 seq304119 98.7 1e-15 seq162813 93.3 5e-14 seq249432 91.5 2e-13 seq464233 84.2 2e-11 seq135603 84.2 2e-11 >seq601675 Length=487 Score = 176 bits (194), Expect = 5e-39 Identities = 174/225 (77%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 93355 ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGC 93414 ||||| ||||||||||| || | || ||||||||||||||||| ||||| ||||| || Sbjct 379 ATCTCTGATGTATGTATCTATAAGAAGGGAATACATTTCAGAATGAACATTTTCCATGGC 320 Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474 || ||||| || ||||||||||| || || || | || |||||||| ||||||||||| Sbjct 319 TATCTGGAAGCCATAGAAACATCTTGCCTCAGTCACTTGAACTTCTTGTGAAAATCTCTC 260 Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534 || | |||||||| || || || ||||| || ||||| || || | | |||||| || Sbjct 259 AACTAAGTTTTCATTTACAATGCCGTCGGAAGCCGCAAAGAATGCAAGAACATGCTTGAT 200 Query 93535 AAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATC 93579 || ||| ||||| |||||| || | ||||| || |||| ||| Sbjct 199 GAAGTGTCTCTCACTATCTTTTAGGGTTTCCCAGTCTGATAAATC 155 >seq562919 Length=404 Score = 150 bits (166), Expect = 2e-31 Identities = 175/235 (74%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 93110 AAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGT 93169 |||||| | || | || || | |||||| |||||||| | ||||| | || || | Sbjct 262 AAACCT-CATCCCTGGAAATAAGCTCATTACTGAATGTGAGTCCTGGCATAAGACCCCTC 204 Query 93170 TTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCA 93229 || || ||||| || || ||||||||||| || || |||||||| ||||| || |||||| Sbjct 203 TTTTTCAGCCAGAAGATGGAAGCAAAACTGCCCGAGAAAAATATTCCTTCTACAGCTGCA 144 Query 93230 AATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAA 93289 || || ||||| | ||| |||| |||| | || || |||||| | || ||||||| Sbjct 143 AAGGCAACAATTCTTTCACCAAATGTTGCAGTCTTGCTTGCGATCCACTGTAGAGCCCAA 84 Query 93290 TCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTC 93344 || ||||| ||||| | ||| || || ||||| || || ||||| ||| |||||| Sbjct 83 TCAGCTTTCTTCTTTACACAGGGAAGAGTTTCAATGGCATTAAACAGGAAATCTC 29 >seq153916 Length=633 Score = 136 bits (150), Expect = 4e-27 Identities = 86/92 (93%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 389 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 330 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATT 126354 ||||||||||||||||||||||||||||| || Sbjct 329 GTGGGTTCGAACCCCACACCTGACAAATTTTT 298 >seq221910 Length=3306 Score = 132 bits (146), Expect = 5e-26 Identities = 91/102 (89%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 3147 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 3088 Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTT 126365 ||||||||||||||||||||||||| | | | || |||||| Sbjct 3087 TGGGTTCGAACCCCACACCTGACAATTGAATTTTTTAATTTT 3046 >seq201923 Length=906 Score = 127 bits (140), Expect = 2e-24 Identities = 79/84 (94%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 410 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 469 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||| Sbjct 470 TGGGTTCGAACCCCACACCTGACA 493 >seq287045 Length=1818 Score = 105 bits (116), Expect = 7e-18 Identities = 123/163 (75%), Gaps = 5/163 (3%) Strand=Plus/Minus Query 92743 TAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCATAACACCACAT 92802 ||||| ||||| || ||||| || || |||||||| | | ||| ||||||||| Sbjct 399 TAGAAGTCTGCGTCGAGTGTGAACACGTTGTCAAGGCGGCTGGC---CATCACACCACAT 343 Query 92803 TTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGAA 92862 ||||||||||| |||||||| || || || || |||||||| ||||||| |||||| | Sbjct 342 TTTTGGTATTCTCCAACTTTCTTCTCGAAAAAGTTTGTCTTACCTTCCAGAGATATTAGA 283 Query 92863 TTCA-CTAGT-GATTGGATTCTTGGCGTTATAATACTTTTCAC 92903 |||| ||| || |||||||| | ||| |||| || || || Sbjct 282 TTCATAAAGTCGAAGGGATTCTTTGTGTTGTAATGCTGTTGAC 240 >seq304119 Length=206 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 92920 TAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAG 92979 ||||||||| || ||||| ||||||||||||||||| || ||||| ||||| || || || Sbjct 4 TAATCTATCTGCGACAAACTCTATGTACTGAGACATTAATTCACAGTTCATCCCAAGCAG 63 Query 92980 ACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGAT 93039 | |||||| || || || || | || |||| || || || || || ||||| | ||| Sbjct 64 TCTTACAGGGAGCGCATCCGTGAGAAACTCTTGTTCAATGACCACAGCATCTTTGATGAT 123 Query 93040 TTCTATTACTC-TACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAA 93098 | | || | | || || | ||| ||||| || | | | | |||| | ||| |||| Sbjct 124 ATGCAGGACACATTCT-TTAGTTGGCTTTTGAACTAAGTGTTGGAACATCAGGCAAGCAA 182 Query 93099 AGTCGGTATGTAAACC 93114 | || ||||| | ||| Sbjct 183 AATCTGTATGCAGACC 198 >seq162813 Length=363 Score = 93.3 bits (102), Expect = 5e-14 Identities = 62/68 (91%), Gaps = 2/68 (3%) Strand=Plus/Minus Query 126282 GGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCGTGGGTTCGAACCCCAC 126339 |||||||||||||||||||||| |||||||||| |||||||||||||||||| |||| Sbjct 363 GGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCGTGGGTTCGAACACCAC 304 Query 126340 ACCTGACA 126347 |||||||| Sbjct 303 ACCTGACA 296 >seq249432 Length=673 Score = 91.5 bits (100), Expect = 2e-13 Identities = 120/163 (74%), Gaps = 5/163 (3%) Strand=Plus/Minus Query 92743 TAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCATAACACCACAT 92802 ||||| ||||| || ||||| || || |||||||| | | ||| ||||||||| Sbjct 401 TAGAAGTCTGCGTCGAGTGTGAACACGTTGTCAAGGCGGCTGGC---CATCACACCACAT 345 Query 92803 TTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGAA 92862 || |||||||| |||||||| || || || || || ||||| ||||||| ||||| | Sbjct 344 TTCTGGTATTCTCCAACTTTCTTCTCGAAAAAGTTCGTCTTACCTTCCAGCGATATTAGA 285 Query 92863 TTCA-CTAGT-GATTGGATTCTTGGCGTTATAATACTTTTCAC 92903 |||| ||| || |||||||| | ||| |||| || || || Sbjct 284 TTCATGAAGTCGAAGGGATTCTTTGTGTTGTAATGCTGTTAAC 242 >seq464233 Length=293 Score = 84.2 bits (92), Expect = 2e-11 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCC 126313 ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 245 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCC 293 >seq135603 Length=595 Score = 84.2 bits (92), Expect = 2e-11 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC 126314 |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 50 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552176814106120