Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq562919 107 4e-18 >seq562919 Length=404 Score = 107 bits (118), Expect = 4e-18 Identities = 162/225 (72%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 ||||| || ||||| || || | ||||| | |||||||| || || ||||| || | Sbjct 37 CTGTTTAATGCCATTGAAACTCTTCCCTGTGTAAAGAAGAAAGCTGATTGGGCTCTACAG 96 Query 42669 TGGATCGAGAGTCCCGAC-GCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGA 42727 ||||||| || | ||| ||||| || || || || | || |||||| | || || || Sbjct 97 TGGATCGCAAG-CAAGACTGCAACATTTGGTGAAAGAATTGTTGCCTTTGCAGCTGTAGA 155 Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC-GA 42786 || || || ||||||||| || || |||||||||||||| || || ||| ||| | Sbjct 156 AGGAATATTTTTCTCGGGCAGTTTTGCTTCCATCTTCTGGCTGAAAAAG-AGGGGTCTTA 214 Query 42787 TGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 |||| |||||||| ||| || || || || |||||| |||| Sbjct 215 TGCCAGGACTCACATTCAGTAATGAGCTTATTTCCAGGGATGAGG 259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 936395973448880