Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq495884 91.5 1e-13 >seq495884 Length=320 Score = 91.5 bits (100), Expect = 1e-13 Identities = 168/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 108349 GGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCCACCGCCCCG 108408 || |||||||||||| ||| || | ||| ||||||| | ||||||||||| ||| Sbjct 25 GGAGTGACGGCCGGCAGCCACCGACTCTGGTCCCACAAGTCGTACAAGGCCACGAAACCG 84 Query 108409 -TTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATCCCGCAGTG 108467 |||| | |||||||| ||| || |||||| | || || | | |||| || Sbjct 85 CTTCA-GCTGTTCCTGATGCTGTGTCATTCGGTGTCGAACCAAAATTCGGTGGCGCATTG 143 Query 108468 GGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACAC-GACGGCCGACCCACACAACG 108526 || || || ||| | ||||| || ||| ||||| ||| ||||| || ||||||| Sbjct 144 GGCCAGGGACCATAGGCTACACCATAAATACAGCGACACAGAC-GCCGATCCGCACAACG 202 Query 108527 CCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGACG 108586 | | | | || |||| | ||| |||||||| ||| | ||| ||| ||| ||||||| | Sbjct 203 CGACCCGTGGTTTCTTTTACTCCCACGTGGGTTGGTTAATGGTGAGGAAGCACCCCGAAG 262 Query 108587 T 108587 | Sbjct 263 T 263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378641832710472