Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq608441 129 4e-25 seq26808 125 5e-24 >seq608441 Length=509 Score = 129 bits (142), Expect = 4e-25 Identities = 151/202 (75%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 14977 AGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAATTGTT 15034 || || || ||||| || |||||||||||| || ||| || ||||||| | ||||| Sbjct 507 AGAGTCGATTCTTTCTGGATGTTGTAATCG--GATAATGTACGTCCGTCTTCAAGTTGTT 450 Query 15035 TGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGC 15094 | |||||| | |||| ||||| || || ||||| || || ||||| |||||| Sbjct 449 TCCCAGCGAAAATCAGTCGCTGCTGATCTGGAGGAATGCCCTCTTTGTCTTGAATTTTTG 390 Query 15095 TTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCA 15154 ||||||| ||||||| ||||| ||| || ||||| || ||||||||||| || | Sbjct 389 CTTTTACATTTTCTATGGTATCAGAGGCTTCGACTTCTAATGTTATGGTTTTACCAGTGA 330 Query 15155 GAGTTTTTACAAAAATTTGCAT 15176 ||||||| |||||||| ||||| Sbjct 329 GAGTTTTAACAAAAATCTGCAT 308 >seq26808 Length=8541 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| | ||| |||||||||||||| || || ||||| || || || || || Sbjct 7608 CCTCCTCTAAGTCTCAAAACTAAATGAAGTGTGGATTCTTTCTGGATATTATAGTCTGAA 7549 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | |||||||||||||| || || | || | ||| |||||||| ||| Sbjct 7548 AGAGTGCGGCCATCTTCTAATTGTTTACCGGCAAAGATGAGACGTTGTTGGTCTGGCGGA 7489 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| |||||| ||| ||| |||| ||||| ||| | ||| || Sbjct 7488 ATACCTTCCTTGTCTTGAATTTTAGCTTTGACATTTTCGATAGTGTCGGAAGCTTCCACC 7429 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || |||||||| || || || || ||||| || || || ||||| Sbjct 7428 TCCAATGTAATGGTCTTCCCCGTAAGGGTTTTGACGAATATCTGCAT 7382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354460982752205