Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq608441 111 4e-19 seq26808 96.9 8e-15 seq162377 93.3 1e-13 >seq608441 Length=509 Score = 111 bits (122), Expect = 4e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 199430 AGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTT 199489 |||||||| || || |||| |||||| || | || || | ||| ||||| || || || Sbjct 507 AGAGTCGATTCTTTCTGGATGTTGTAATCGGATAATGTACGTCCGTCTTCAAGTTGTTTC 448 Query 199490 CCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC 199549 || ||||| || || |||||||| || ||| ||| || ||| || ||||| |||||| Sbjct 447 CCAGCGAAAATCAGTCGCTGCTGATCTGGAGGAATGCCCTCTTTGTCTTGAAT-TTTTGC 389 Query 199550 TTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAG 199608 || || ||| | ||| || | | ||| || || || || || || ||||| ||||| Sbjct 388 TTTTACATTTTCTATGGTATCAGAGGCTTCGACTTCTAATGTTATGGTTTTACCAGTGAG 329 Query 199609 AGTTTTCACAAAAATTTG 199626 |||||| |||||||| || Sbjct 328 AGTTTTAACAAAAATCTG 311 >seq26808 Length=8541 Score = 96.9 bits (106), Expect = 8e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 || |||||||| || | || || || || || || |||| || ||||| | | ||| Sbjct 7603 TCTAAGTCTCAAAACTAAATGAAGTGTGGATTCTTTCTGGATATTATAGTCTGAAAGAGT 7544 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||||||| | || || ||||| ||||||||||| || ||||| || ||| || Sbjct 7543 GCGGCCATCTTCTAATTGTTTACCGGCAAAGATGAGACGTTGTTGGTCTGGCGGAATACC 7484 Query 199528 TTCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586 ||| || ||||| ||| || || || ||||| ||||| | | ||| || |||| Sbjct 7483 TTCCTTGTCTTGAAT-TTTAGCTTTGACATTTTCGATAGTGTCGGAAGCTTCCACCTCCA 7425 Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | || || ||||| ||||| || ||||| || || || || Sbjct 7424 ATGTAATGGTCTTCCCCGTAAGGGTTTTGACGAATATCTG 7385 >seq162377 Length=1555 Score = 93.3 bits (102), Expect = 1e-13 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||| ||||| ||||| || || || ||||| | |||||||| | ||| || Sbjct 112 CGAAGACGCAGTACAAGATGGAGTGTGGATTCTTTTTGAATATTGTAGTCTGACAATGTG 53 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 | ||| |||||||||||||| || || ||||||||||| || || || ||| Sbjct 52 CGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATGAGACGTTGTTGATCTGGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1168757294220171