Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq562919 84.2 3e-11 >seq562919 Length=404 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/229 (69%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 119500 ATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCA 119559 |||||| | || || ||||||| || || |||||||||||||| ||||| |||| Sbjct 272 ATTCTTAAACAAACC--TCATCCCTGGAAATAAGCTCATTACTGAATGTGAGTCCTGGCA 215 Query 119560 TGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCT 119619 | || || || || || ||||| ||||||| | |||||| || || || || || || | Sbjct 214 TAAGACCCCTCTTTTTCAGCCAGAAGATGGAAGCAAAACTGCCCGAGAAAAATATTCCTT 155 Query 119620 CCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTG---TCGAACCACT 119676 | ||| || || || | | | ||| |||| | | || |||| ||| ||||| Sbjct 154 CTACAGCTGCAAAGGCAACAATTCTTTCACCAAATGTTGCAGTCTTGCTTGCGATCCACT 95 Query 119677 TGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGC 119725 |||||||| | || || || || ||||| | ||||| ||||| Sbjct 94 GTAGAGCCCAATCAGCTTTCTTCTTTACACAGGGAAGAGTTTCAATGGC 46 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584021879911400