Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq237220 129 7e-25 >seq237220 Length=3575 Score = 129 bits (142), Expect = 7e-25 Identities = 683/1082 (63%), Gaps = 18/1082 (2%) Strand=Plus/Plus Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562 || ||||||||| ||| ||||| || | |||||| | || || | || ||||| Sbjct 1000 GGAACAAATGGTGTGTCAAATGGTCTTGTACCAATGTTACGAGTTTACAATAATACAGCT 1059 Query 75563 CGCTATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCA 75619 | ||||| |||||| || | ||| || | | || ||||| || |||||| Sbjct 1060 AGATATGTTGATCAAGGAGGTAATAAGCGCCCTGGTGCTTTTGCAGTCTATTTAGAACCA 1119 Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679 |||||||||||||| | || ||| | || ||| ||| || | ||||| | Sbjct 1120 TGGCATGCCGATATATTTGAATTCTTAGATTTAAAGAAAAACACTGGAAAAGAAGAAGTA 1179 Query 75680 CGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 || || || || |||| | ||||||| || || ||||||||||| | ||||| Sbjct 1180 CGTGCCAGGGAACTTTTTTATGCATTGTGGATACCTGATCTTTTCATGAAAAGAGTTGAA 1239 Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799 | | ||| |||| | ||| | ||||| || | || || | | ||| | Sbjct 1240 AATGATGGCGTATGGACCCTTATGTGTCCTCACGATTGCCCTGGGTTAGCTGACTGTTGG 1299 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACT 75859 || | || |||||| || | || || |||||| | || |||| | | Sbjct 1300 GGAAAAGAATTTGAATCCTTATATGAAACCTATGAAAAAGAAAATAGATTTATTAAACAA 1359 Query 75860 GTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCA 75919 ||| ||| | ||||||| || || | || | || |||||||| || ||| Sbjct 1360 GTAAGAGCACAAGTACTTTGGAAAGCAATAATAGAAGCTCAAGTAGAGACTGGTACTCCA 1419 Query 75920 TATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATC 75979 || ||| | | || ||| | ||||| | || ||||| || || ||||| || || || Sbjct 1420 TACATGTTATTTAAAGATTCATGTAATAGAAAAAGTAATCAGAAAAATTTAGGTACCATT 1479 Query 75980 AAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTT 76039 || | || || ||||| ||||| |||| | ||| | | ||||| ||| || Sbjct 1480 AAATGTAGTAACCTGTGCACTGAAATAGTAGAATTTACATCTGATGATGAAGTGGCAGTA 1539 Query 76040 TGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGAT 76099 ||||| || || || || ||||| | || ||| ||||| | | || | | || Sbjct 1540 TGCAACTTAGCTTCTATTGCCCTAAATATGTTTGTTAATGATAACAAA---ACATATAAT 1596 Query 76100 TATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGAC 76159 | || ||| | | ||| | || || | ||| || ||||| | || | |||||||| Sbjct 1597 TTTGCGAAATTAAAAGAAGTTACTAAAACTGTAACAGAAAATTTGAATAAAATCATTGAC 1656 Query 76160 AGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGT 76219 ||||| |||||| ||| | || ||| || ||| | | || |||||||||| Sbjct 1657 GTAAATTATTATCCTGTTCCGGAAGCAAAAAAATCCAATTTTAGGCATCGACCTATTGGA 1716 Query 76220 TTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTT-GTGCCGCTACGCATTTGA---TTC 76275 | |||||||||||||| || |||| |||||||| ||| ||| | | || | | Sbjct 1717 ATAGGTGTTCAAGGTCTTGCTGATGCTTTTATTTTAATGCGTTTAC-CTTACGAAAGTCC 1775 Query 76276 AGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGA 76335 | ||||| | | | ||| | || |||||||| || || | | | | | || Sbjct 1776 A---GAAGCTATTAAACTAAATCAACAAATATTTGAAACTATTTACTATGGAGCATTAGA 1832 Query 76336 GGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGC 76395 || ||||||||||| || ||| | || || || |||| || || || || Sbjct 1833 AGCAAGTTGTGAATTAGCAGAAAAGTATGGAGTGTACGAAACATACGAAGGGAGCCCTGC 1892 Query 76396 GTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCA--AGCTCAACTACGAC 76453 | ||| | | |||| || |||| |||| || ||| || | | | ||| Sbjct 1893 AAGTCTAGGTATATTACAGTACGAAATGT-GGAATAAAAATCCAACAGATTTA-TGGGAC 1950 Query 76454 TGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCA 76513 ||| | | | || || ||| || | || ||||| || ||||||||| ||| Sbjct 1951 TGGACTTCTTTAAAAAAAAACATTGCTAAGCATGGCCTTCGCAATTCTCTTTTGATAGCA 2010 Query 76514 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATAC 76573 |||||||| || ||||| || || || || || || |||||||||| |||||||| | | Sbjct 2011 CCAATGCCCACTGCCTCAACAGCCCAGATTTTAGGAAATAATGAATCTTTTGAACCTTTC 2070 Query 76574 AC 76575 || Sbjct 2071 AC 2072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591551607009440