Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq26808 131 3e-25 >seq26808 Length=8541 Score = 131 bits (144), Expect = 3e-25 Identities = 182/254 (72%), Gaps = 1/254 (0%) Strand=Plus/Minus Query 193124 AATTTATAT-ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATAT 193182 ||||||||| ||| ||||| | || | || | ||| | ||| | ||||| |||| Sbjct 7619 AATTTATATTACCTCCTCTAAGTCTCAAAACTAAATGAAGTGTGGATTCTTTCTGGATAT 7560 Query 193183 TATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTT 193242 ||||||| || | || | ||| ||||||||||| |||||||| || | | |||| Sbjct 7559 TATAGTCTGAAAGAGTGCGGCCATCTTCTAATTGTTTACCGGCAAAGATGAGACGTTGTT 7500 Query 193243 GATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGG 193302 | || || || || ||||| || ||||| ||||| | ||| | |||| ||||| |||| Sbjct 7499 GGTCTGGCGGAATACCTTCCTTGTCTTGAATTTTAGCTTTGACATTTTCGATAGTGTCGG 7440 Query 193303 AAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTT 193362 ||| || || || | || || || || || || || ||||| || ||||| |||||| Sbjct 7439 AAGCTTCCACCTCCAATGTAATGGTCTTCCCCGTAAGGGTTTTGACGAATATCTGCATTG 7380 Query 193363 TATTAGTAAAATAA 193376 | ||| |||||||| Sbjct 7379 TGTTACTAAAATAA 7366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 892087035734160