Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq26808 140 5e-28 seq608441 118 2e-21 seq601675 102 1e-16 >seq26808 Length=8541 Score = 140 bits (154), Expect = 5e-28 Identities = 176/242 (73%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 155809 ATTTATGTAATAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAG 155868 |||| |||| | |||||| ||||| | ||||| | || || || || |||||||| | Sbjct 7368 ATTTTAGTAACACAATGCAGATATTCGTCAAAACCCTTACGGGGAAGACCATTACATTGG 7427 Query 155869 AAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCA 155928 | || |||| ||| || | ||| ||| || ||| |||||| ||||| || ||||| | Sbjct 7428 AGGTGGAAGCTTCCGACACTATCGAAAATGTCAAAGCTAAAATTCAAGACAAGGAAGGTA 7487 Query 155929 TACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTT 155988 | || ||||| |||||| | | || | ||||||||| || | |||||| | | ||| Sbjct 7488 TTCCGCCAGACCAACAACGTCTCATCTTTGCCGGTAAACAATTAGAAGATGGCCGCACTC 7547 Query 155989 TATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCG 156048 | ||||| |||||||| ||||| | || ||||||||||| || ||| | ||||| | Sbjct 7548 TTTCAGACTATAATATCCAGAAAGAATCCACACTTCATTTAGTTTTGAGACTTAGAGGAG 7607 Query 156049 GT 156050 || Sbjct 7608 GT 7609 >seq608441 Length=509 Score = 118 bits (130), Expect = 2e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| ||||||| | ||||| ||||| || |||||||||||||||| ||| Sbjct 308 ATGCAGATTTTTGTTAAAACTCTCACTGGTAAAACCATAACATTAGAAGTCGAAGCCTCT 367 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || ||| || ||| ||||| ||||| ||||| ||||| |||||||| || Sbjct 368 GATACCATAGAAAATGTAAAAGCAAAAATTCAAGACAAAGAGGGCATTCCTCCAGATCAG 427 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || |||||| || || || || || ||||| | || ||||| ||||| || Sbjct 428 CAGCGACTGATTTTCGCTGGGAAACAACTTGAAGACGGACGTACATTATCCGATTACAAC 487 Query 156003 ATATCCAAAGAGGCGACGCT 156022 || ||||| |||| || Sbjct 488 ATCCAGAAAGAATCGACTCT 507 >seq601675 Length=487 Score = 102 bits (112), Expect = 1e-16 Identities = 150/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 18414 CTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTT 18473 ||||||| ||| | || || || || || | | ||||||||||||||||| | ||| Sbjct 385 CTTTGGA-TCTCTGATGTATGTATCTATAAGAAGGGAATACATTTCAGAATGAACATTTT 327 Query 18474 CCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTATAAA 18533 |||| |||||||| || | ||| || |||| ||||| | ||||| || ||| Sbjct 326 CCATGGCTATCTGGAAGCCATAGAAACATCTTGCCTCAGTCACTTGAACTTCTTGTGAAA 267 Query 18534 ATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACAT 18593 |||| || || || || ||||| || || ||||| | || || || ||||| | ||||| Sbjct 266 ATCTCTCAACTAAGTTTTCATTTACAATGCCGTCGGAAGCCGCAAAGAATGCAAGAACAT 207 Query 18594 ATTTAATGAAATGTTTTTCATTATCCTTGAG 18624 || ||||| ||| | ||| |||| || || Sbjct 206 GCTTGATGAAGTGTCTCTCACTATCTTTTAG 176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 725715922710800