Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq462883 114 1e-20 seq26808 84.2 2e-11 seq617918 82.4 6e-11 >seq462883 Length=292 Score = 114 bits (126), Expect = 1e-20 Identities = 128/170 (75%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 99932 CAAAAACCAGAGCAATTGGCCGAAGCCGGTTTTTATTACACCGGCAAAGGTGACAAAGTT 99991 || ||||| ||| ||||||| || ||||| |||| || || ||| ||||||||||| | Sbjct 107 CAGAAACCCGAGGAATTGGCGGAGGCCGGATTTTTCTATACAGGCCAAGGTGACAAAACT 166 Query 99992 AAATGTTTTCATTGCGACGGCGGCCTCAAAGACTGGGAAAGCACCGACGAGCCGTGGCAT 100051 ||||| || |||| ||||| || || ||||| |||||||| |||| |||||| | Sbjct 167 AAATGCTTCTATTGTGACGGAGGGCTAAAAGATTGGGAAAGTGATGACGTTCCGTGGGAA 226 Query 100052 GAACACGCACGTTGGTTTGATCGCTGCACATACGTGCGGCTTGT-AAAGG 100100 | ||||| | ||||| || || ||| ||||||||| || || ||||| Sbjct 227 CAGCACGCTAGATGGTTCGACCGTTGCGCATACGTGCAACTGGTGAAAGG 276 >seq26808 Length=8541 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/233 (68%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| || || || ||||| | || || ||||||||||| |||| ||| | Sbjct 7381 AATGCAGATATTCGTCAAAACCCTTACGGGGAAGACCATTACATTGGAGGTGGAAGCTTC 7440 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| || | | | || ||| |||||| ||||| ||||| | || || || Sbjct 7441 CGACACTATCGAAAATGTCAAAGCTAAAATTCAAGACAAGGAAGGTATTCCGCCAGACCA 7500 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||| | || || | ||| || ||||||||||||||| ||| | || || || Sbjct 7501 ACAACGTCTCATCTTTGCCGGTAAACAATTAGAAGATGGCCGCACTCTTTCAGACTATAA 7560 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGATAAT 106491 || || |||||||| ||||| |||||||| ||||| | ||||||| |||| Sbjct 7561 TATCCAGAAAGAATCCACACTTCATTTAGTTTTGAGACTTAGAGGAGG-TAAT 7612 >seq617918 Length=543 Score = 82.4 bits (90), Expect = 6e-11 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 99599 TGGCCTGTGTCTTTTTTGGAACCAAGTCAAATGGCCGCCAACGGGTTTTATTATTTGGGG 99658 ||||| || | |||||| ||| ||| ||||| |||||| || || || | || Sbjct 306 TGGCCCGTTACGTTTTTGACACCGGAGCAATTGGCCCGCAACGGATTCTACTACCTCGGT 365 Query 99659 CGCGCGGACGAAGTGCGCTGCGCGTTTTGCAAAGTTGAAATAATGCGCTGGTTGGAGGGC 99718 |||| ||||| || |||| || || || || || ||||| ||| | ||| | |||||| Sbjct 366 CGCGGCGACGAGGTTTGCTGTGCTTTCTGTAAGGTAGAAATCATGAGGTGGGTCGAGGGC 425 Query 99719 GACGACCCGGCTGCAGATCATAAACGATGGGCGCCGCAATGCCCGTTT 99766 |||||||| ||||| || ||| | ||||| || || || || ||| Sbjct 426 GACGACCCTGCTGCCGACCATCGGAGGTGGGCCCCCCAGTGTCCCTTT 473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399030043779104