Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq51755 197 1e-45 seq237220 159 3e-34 seq26808 123 2e-23 seq608441 118 1e-21 seq255931 84.2 2e-11 >seq51755 Length=2487 Score = 197 bits (218), Expect = 1e-45 Identities = 588/893 (66%), Gaps = 27/893 (3%) Strand=Plus/Plus Query 104559 AAACGTGGTGGCGGCCTATTTTGTAGAGTGGGGTGTGTATCAACGCGCGTTTGCCGCCAG 104618 ||| || |||| ||||| || || || ||||| ||||||| | ||| ||| Sbjct 981 AAAAGTTGTGGGCGCCTACTTCGTCGAATGGGGCGTGTATCCTAGAAAGTTCCCCGTGGA 1040 Query 104619 CGACGTGCCCGCGCCCAATCTGTCGCACATGCTTTACGGATTTATACCGATTTGCGGTGG 104678 | | | || | || || ||| | || |||||||||| || || |||||||| ||||| Sbjct 1041 CCGCATCCCGGTTCCGAACCTGACTCATTTGCTTTACGGCTTCATCCCGATTTGTGGTGG 1100 Query 104679 CGACGGCATCAACGACGCTCT-AAAGACCGTTCCGGGTAGTTTTGAAGCGTTGCAAAAAT 104737 || |||||||| ||| | | ||||| || || |||||| |||| ||||| | Sbjct 1101 TGATGGCATCAATGACAGTTTGAAAGAAA-TTGAAGGCAGTTTTCAAGCATTGCAGCGTT 1159 Query 104738 CGTGCGCTGGACGGGAAAACTTCAAAGTGGCCATTCACGATCCGTGGGCGGCGGTGCAAA 104797 | ||| || || ||| ||||||| || | || |||||||| |||||||| |||| | Sbjct 1160 CATGCAGCGGCCGTGAAGACTTCAAGGTTTCTATCCACGATCCCTGGGCGGCCCTGCAGA 1219 Query 104798 AACCGCAAAAAGGTGCCTCCGCTTGGAACGAACCGTACAAAGGCAATTTTGGTCAGATAA 104857 | || ||||| || || | |||||||| || |||||||| || || || ||| | | Sbjct 1220 AGCCTCAAAAGGGATTATCGTCCTGGAACGAGCCCTACAAAGGTAACTTCGGGCAGCTGA 1279 Query 104858 TGGCCATCAAAAAAGCCAATCCTCAATTGCGCGTATTGCCCTCGGTGGGCGGGTGGACGC 104917 || | ||| |||| ||| || || | || || ||| | || || ||||| Sbjct 1280 TGCAGTTGAAACAAGCGAATACTGGTTTAAAGATCTTACCTTCGATTGGTGGCTGGACAT 1339 Query 104918 TGTCCGATCCTTTTTATCACATGCACGACGCTGAAA---AACGTGCCACGTTT-GTGGAG 104973 || ||||||| || | || | ||| || | ||| | |||| | ||||| || | Sbjct 1340 TGGCCGATCCCTTCT-TCTTCTTCAC--CGATAAAACCAAGCGTGAC-CGTTTCGTTGGC 1395 Query 104974 TCGGTGCGCGAATTTTTGTTGACTTGGAAATTCTTCGATGGCGTCGACATCGATTGGGAG 105033 || ||| || || | || ||||| ||||||||||| ||||| || ||||||||| Sbjct 1396 TCCGTGAAAGACTTCCTCCAAACCTGGAAGTTCTTCGATGGTGTCGATATTGATTGGGAG 1455 Query 105034 TTTCCGGGCGGCAAAGGCGCCAACCCCAATCAAGGCGACGCGAAACGCGATGCTCTCACG 105093 || || |||||||||||||| ||||| | | || | | ||| || | | | Sbjct 1456 TTCCCTGGCGGCAAAGGCGCTAACCCTGACCTCGGTGGTCCTAAAGACGGAGATGTA--- 1512 Query 105094 TACGTGTCTCTTTTGAAAGAGTTGCGTTCGATGCTCGACGATTTGCAAAAACAAACCAAT 105153 ||||| || ||||||| || ||| ||| | || || || | || | Sbjct 1513 TACGTTCAGCTCATGAAAGAATTACGTCAAATGTTGGATGAGCTGGCGGCTGAGACTGGT 1572 Query 105154 CGCTCCGAGCGTTTGTTGCTCACCAGCGCCATCAGCGCGGGCGACGACAAGATCGCCGTG 105213 | | | || ||| ||| |||||||| || || ||||||||| || Sbjct 1573 AGAACTTA-CGA-----GCTGACCTCTGCCATCAGTGCCGGTTGGGACAAGATCCAAGTT 1626 Query 105214 GTGGATTACGGTCACGCTCAAACCTACTTGGATTTGATATTTTTG--ATGAGTTACGATT 105271 ||| | ||| | || || | ||| ||||| ||||||| | ||||||||||| | Sbjct 1627 GTGAACTACAAGGAAGCCCAGAAGTACATGGATC--ATATTTTCGTCATGAGTTACGACT 1684 Query 105272 TTAAAGGCGCCTGGTCCAACACAAATCTCGGTCATCAGACGGCGTTGTACGCACCCGCGT 105331 | || || |||||||| ||| | |||||| |||||||| || | ||||| || | | Sbjct 1685 TCAAGGGTGCCTGGTCTAACGACACTCTCGGACATCAGACCGCTCTATACGCTCCGTCTT 1744 Query 105332 GGAAACCCAACGAACGCTACACCACCGATTACGCCGTGAACGCTCTGTTGAAACAGAACG 105391 ||| || || ||| ||||||||||| | || | | |||| || || || | Sbjct 1745 GGAGTCCAAAGGAAACTTACACCACCGACTTCGGTATCAGGTATCTGCTG--ACCCAAGG 1802 Query 105392 TGCTGCCCCGCAAAA--TTGTTGTTGGCGTGGCGATGTACGGCCGCGGTTGGA 105442 || | | || |||| | ||||| || || || |||||||| || || |||| Sbjct 1803 TGTTCCGCCCAAAAAGCTGGTTGTCGGTGTTGCTATGTACGGACGTGGCTGGA 1855 >seq237220 Length=3575 Score = 159 bits (176), Expect = 3e-34 Identities = 516/799 (65%), Gaps = 4/799 (1%) Strand=Plus/Plus Query 8500 ATCATTGATGTCAATTTTTATCCCTTGGAAGAAGCGCGCGTATCGAACATGCGCCACAGA 8559 |||||||| || |||| |||||| | ||||| ||| || | | || || Sbjct 1648 ATCATTGACGTAAATTATTATCCTGTTCCGGAAGCAAAAAAATCCAATTTTAGGCATCGA 1707 Query 8560 CCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCCATGTTGCGCCTCCCCTAC 8619 || |||| | || || |||||||| || || || ||| | |||| | || ||| Sbjct 1708 CCTATTGGAATAGGTGTTCAAGGTCTTGCTGATGCTTTTATTTTAATGCGTTTACCTTAC 1767 Query 8620 GAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAAACGGTGTATTACGGCGCA 8679 ||||| | |||||| | || || | ||||| ||||| | || || || ||| Sbjct 1768 GAAAGTCCAGAAGCTATTAAACTAAATCAACAAATATTTGAAACTATTTACTATGGAGCA 1827 Query 8680 TTAGAAGCCAGCTGTCAACTTGCCCGAGAATTGGGCACGTACGAATCGTACGCGGGCAGC 8739 |||||||| || ||| || | || | | | || ||||||| | |||| || ||| Sbjct 1828 TTAGAAGCAAGTTGTGAATTAGCAGAAAAGTATGGAGTGTACGAAACATACGAAGGGAGC 1887 Query 8740 CCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGTCACGCCCACCTCTTTGTGG 8799 ||||| || | || ||||| || ||||| ||||||||| | || || ||| ||| Sbjct 1888 CCTGCAAGTCTAGGTATATTACAGTACGAAATGTGGAATAAAAATCCAACAGATTTATGG 1947 Query 8800 AATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTG 8859 | |||| ||| ||| || |||||| | || | |||||||| || ||| | Sbjct 1948 GACTGGACTTCTTTAAAAAAAAACATTGCTAAGCATGGCCTTCGCAATTCTCTTTTGATA 2007 Query 8860 GCTTACATGCCCACCGCCACGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCG 8919 || |||||||| ||| | || || || || | ||||| || ||||| ||||| || Sbjct 2008 GCACCAATGCCCACTGCCTCAACAGCCCAGATTTTAGGAAATAATGAATCTTTTGAACCT 2067 Query 8920 TTCACCAACAACGTGTACGTGAGACGAGTGTTGGCCGGCGATTTTTTAATGCTGAATCGT 8979 ||||| || | || ||||| || || | || || ||| | | | |||| Sbjct 2068 TTCACTTCTAATATTTATCAAAGACGTGTTTTATCTGGAGAATTTCAAGTTGTAAATCAC 2127 Query 8980 CATTTGATGCGCGACTTGATCGAAGCGGGCGTTTACGACGACAAAATGCGCGATGCCATC 9039 |||||| | || || ||| ||||| | | | || || ||||| || ||| Sbjct 2128 CATTTGCTTCGTGATCTGACAGAAGCAGATTTATGGGATGAGGAAATGAAAAATCTCATT 2187 Query 9040 GTGGAAGCCAACGGCAGCGTTCAGAACATTGACGCGGTGCCTCAACACATTAAAGAGCTG 9099 | | || || | || || || || | ||| | | || ||| | Sbjct 2188 ATACACAATAATGGATCTATACAAAATATCGAAAGTATACCTACAGAAATACGAGACTTA 2247 Query 9100 TATAAAACCGTTTGGGAAA--TGAAGCAAAGCACGCTGATCGGCATGGCTGCGGATAGAG 9157 ||||| || |||||||||| | | |||| || || |||||||| ||| | | Sbjct 2248 TATAAGACAGTTTGGGAAATTTCAGTCAAA--ACAACAATACAAATGGCTGCTGATCGTG 2305 Query 9158 GCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTAGCCGCACCAACTTACGCTT 9217 | |||||||||||||| |||||||||||||| | || || | || | ||||| Sbjct 2306 GAGCTTTTATTGATCAAAGTCAATCTTTTAATATACATGTTGCTGAGCCGAATTACGGGA 2365 Query 9218 TGATGTCCAGCATTCATTATTTAACTTGGAAAATGGGTTTAAAAACAGGCATGTACTATT 9277 | | | ||||||| || | ||||||||||||||||||||||| ||||| |||| Sbjct 2366 AGTTAACTTCTATTCATTTTTATTCATGGAAAATGGGTTTAAAAACAGGGATGTATTATT 2425 Query 9278 TGCGCACAAAACCCGCCGC 9296 |||| |||||||| || || Sbjct 2426 TGCGAACAAAACCAGCGGC 2444 >seq26808 Length=8541 Score = 123 bits (136), Expect = 2e-23 Identities = 169/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 || |||||||| |||| ||| || | || || |||||||| || || || || ||||| Sbjct 7611 TTACCTCCTCTAAGTCTCAAAACTAAATGAAGTGTGGATTCTTTCTGGATATTATAGTCT 7552 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || ||| | || || | ||||| || ||||| || | ||| || || || ||| Sbjct 7551 GAAAGAGTGCGGCCATCTTCTAATTGTTTACCGGCAAAGATGAGACGTTGTTGGTCTGGC 7492 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || ||||| || ||||||||||| |||||| || | |||||||| | |||| Sbjct 7491 GGAATACCTTCCTTGTCTTGAATTTTAGCTTTGACATTTTCGATAGTGTCGGAAGCTTCC 7432 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTT 134719 || || | |||||||| || || || | ||||| ||||| || |||||| |||| Sbjct 7431 ACCTCCAATGTAATGGTCTTCCCCGTAAGGGTTTTGACGAATATCTGCATTGTGTT 7376 >seq608441 Length=509 Score = 118 bits (130), Expect = 1e-21 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 134514 AGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTG 134573 || || ||||| || || |||||||| ||| | || | ||| || || ||||| Sbjct 507 AGAGTCGATTCTTTCTGGATGTTGTAATCGGATAATGTACGTCCGTCTTCAAGTTGTTTC 448 Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || || ||||||| ||||||||||| || || ||||| ||||| |||||||||||| | Sbjct 447 CCAGCGAAAATCAGTCGCTGCTGATCTGGAGGAATGCCCTCTTTGTCTTGAATTTTTGCT 388 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | || || || | ||| || || | || ||||||||||| || | | Sbjct 387 TTTACATTTTCTATGGTATCAGAGGCTTCGACTTCTAATGTTATGGTTTTACCAGTGAGA 328 Query 134694 GTTTTAACGAAAATTTGCATTTTGTTTT 134721 |||||||| ||||| ||||| || ||| Sbjct 327 GTTTTAACAAAAATCTGCATGGTGGTTT 300 >seq255931 Length=537 Score = 84.2 bits (92), Expect = 2e-11 Identities = 241/367 (66%), Gaps = 13/367 (4%) Strand=Plus/Plus Query 104995 ACTTGGAAATTCTTCGATGGCGTCGACATCGATTGGGAGTTTCCGGGCGGCAAAGGCGCC 105054 || ||||| ||||||||||| ||||| || || |||||||| || |||||||||||||| Sbjct 168 ACCTGGAAGTTCTTCGATGGTGTCGATATTGACTGGGAGTTCCCTGGCGGCAAAGGCGCT 227 Query 105055 AACCCCAATCAAGGCGACGCGAAACGCGATGCTCTCACGTACGTGTCTCTTTTGAAAGAG 105114 ||||| | | || | | ||| || | | | ||||| || |||| || Sbjct 228 AACCCTGACCTCGGTGGTCCTAAAGACGGAGATGTA---TACGTTCAGCTCATGAAGGAA 284 Query 105115 TTGCGTTCGATGCTCGACGATTTGCAAAAACAAACCAATCGCTCCGAGCGTTTGTTGCTC 105174 || ||| ||| | || || || | || | | | | || ||| Sbjct 285 TTACGTCAAATGTTGGATGAGCTGGCGGCTGAGACTGGTAGAACTTA-CGA-----GCTG 338 Query 105175 ACCAGCGCCATCAGCGCGGGCGACGACAAGATCGCCGTGGTGGATTACGGTCACGCTCAA 105234 ||| ||||||||||| || ||||||||| || ||| | ||| | || || Sbjct 339 ACCTCTGCCATCAGCGCCGGTTGGGACAAGATCCAAGTTGTGAACTACAAGGAAGCCCAG 398 Query 105235 ACCTACTTGGATTTGATATTTT--TGATGAGTTACGATTTTAAAGGCGCCTGGTCCAACA 105292 | ||| |||| ||||||| | ||||||||||| || || || |||||||| ||| Sbjct 399 AAGTACATGGA--CCATATTTTCGTCATGAGTTACGACTTCAAGGGTGCCTGGTCTAACG 456 Query 105293 CAAATCTCGGTCATCAGACGGCGTTGTACGCACCCGCGTGGAAACCCAACGAACGCTACA 105352 | |||||| || ||||| || ||||||| || | |||| || || ||| |||| Sbjct 457 ACACTCTCGGACACCAGACCGCTCTGTACGCTCCGTCTTGGAGTCCAAAGGAAACTTACA 516 Query 105353 CCACCGA 105359 ||||||| Sbjct 517 CCACCGA 523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501147285580760