Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq601675 123 2e-23 >seq601675 Length=487 Score = 123 bits (136), Expect = 2e-23 Identities = 130/171 (76%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 43850 GTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTT 43909 ||| | || || ||||| || |||||| || || |||||||| || ||| | ||| Sbjct 209 GTTCTTGCATTCTTTGCGGCTTCCGACGGCATTGTAAATGAAAACTTAGTTGAGAGATTT 268 Query 43910 GCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAA 43969 | |||||||||||| | | || ||| ||||||| ||||| || || || ||||| ||| Sbjct 269 TCACAAGAAGTTCAAGTGACTGAGGCAAGATGTTTCTATGGCTTCCAGATAGCCATGGAA 328 Query 43970 AATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 ||| ||||||| |||||||| ||||| |||||||| ||||||| |||| Sbjct 329 AATGTTCATTCTGAAATGTATTCCCTTCTTATAGATACATACATCAGAGAT 379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394196412792565