Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq237220 116 4e-21 >seq237220 Length=3575 Score = 116 bits (128), Expect = 4e-21 Identities = 251/375 (67%), Gaps = 3/375 (1%) Strand=Plus/Plus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 |||||||| || | | ||||| ||||||||||| ||||||||| | | ||||| Sbjct 1378 TGGAAAGCAATAATAGAAGCTCAAGTAGAGACTGGTACTCCATACATGTTATTTAAAGAT 1437 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 | ||||| ||| |||||||| || ||||| ||| || || || || || || Sbjct 1438 TCATGTAATAGAAAAAGTAATCAGAAAAATTTAGGTACCATTAAATGTAGTAACCTGTGC 1497 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 105067 || ||||| | ||||||||| | ||||| ||| || || ||| | || || || Sbjct 1498 ACTGAAATAGTAGAATTTACATCTGATGATGAAGTGGCAGTATGCAACTTAGCTTCTATT 1557 Query 105068 GCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAA 105127 || || | || ||| || || | || |||| | ||| || ||| | | ||| Sbjct 1558 GCCCTAAATATGTTTGTTAAT---GATAACAAAACATATAATTTTGCGAAATTAAAAGAA 1614 Query 105128 GTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTT 105187 ||||| |||||||| || |||| | || | | | ||||| ||||| ||| || ||| Sbjct 1615 GTTACTAAAACTGTAACAGAAAATTTGAATAAAATCATTGACGTAAATTATTATCCTGTT 1674 Query 105188 GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTC 105247 | || ||||| ||| | || || || || ||||| | |||||||| ||||| Sbjct 1675 CCGGAAGCAAAAAAATCCAATTTTAGGCATCGACCTATTGGAATAGGTGTTCAAGGTCTT 1734 Query 105248 GCGGATGTATTCATT 105262 || |||| || ||| Sbjct 1735 GCTGATGCTTTTATT 1749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578354752816120