Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq26808 114 8e-21 seq608441 100 2e-16 >seq26808 Length=8541 Score = 114 bits (126), Expect = 8e-21 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||||||| | ||| || ||||| || ||| || || || || ||||| |||||| Sbjct 7608 CCTCCTCTAAGTCTCAAAACTAAATGAAGTGTGGATTCTTTCTGGATATTATAGTCTGAA 7549 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| | ||||||||||||||| || | ||| |||||||| ||||| Sbjct 7548 AGAGTGCGGCCATCTTCTAATTGTTTACCGGCAAAGATGAGACGTTGTTGGTCTGGCGGA 7489 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTC-TTCGCTCTCCA 34657 | || ||||||||| ||| ||| | ||| || | || ||||| ||| |||| Sbjct 7488 ATACCTTCCTTGTCT-TGAATTTTAGCTTTGACATTTTCGATAGTGTCGGAAGCT-TCCA 7431 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | |||| || || || || || || | ||||| || || |||||||| Sbjct 7430 CCTCCAATGTAATGGTCTTCCCCGTAAGGGTTTTGACGAATATCTGCAT 7382 >seq608441 Length=509 Score = 100 bits (110), Expect = 2e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 || || || ||||| ||||| || | ||| || |||||||||||||||| || || || Sbjct 498 TCTTTCTGGATGTTGTAATCGGATAATGTACGTCCGTCTTCAAGTTGTTTCCCAGCGAAA 439 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTG-TTTTAACGA 34634 || | ||||| || || || || | ||||| |||||| ||| ||||| ||||| Sbjct 438 ATCAGTCGCTGCTGATCTGGAGGAATGCCCTCTTTGTCT-TGAATTTTTGCTTTTACATT 380 Query 34635 TAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 | || || || | || ||||| | ||||| |||||||| || | ||||| || Sbjct 379 TTCTATGGTATCAGAGGCTTCGACTTCTAATGTTATGGTTTTACCAGTGAGAGTTTTAAC 320 Query 34695 AAAAATCTGCATGTTGATT 34713 ||||||||||||| || || Sbjct 319 AAAAATCTGCATGGTGGTT 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 312148462520729