Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq26808 140 7e-28 seq162377 87.8 4e-12 >seq26808 Length=8541 Score = 140 bits (154), Expect = 7e-28 Identities = 163/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 |||||| | || | ||||| ||||| ||||| ||||| ||||| || | ||| || | Sbjct 7600 AAGTCTCAAAACTAAATGAAGTGTGGATTCTTTCTGGATATTATAGTCTGAAAGAGTGCG 7541 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 |||||||| | || || || || ||||| || ||||||||||| || |||| ||||| Sbjct 7540 GCCATCTTCTAATTGTTTACCGGCAAAGATGAGACGTTGTTGGTCTGGCGGAATACCTTC 7481 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 |||||| || || || ||| || |||||||| ||||| || ||| ||||| | || Sbjct 7480 CTTGTCTTGAATTTTAGCTTTGACATTTTCGATAGTGTCGGAAGCTTCCACCTCCAATGT 7421 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || ||||| ||||| || || || || || | ||||||| Sbjct 7420 AATGGTCTTCCCCGTAAGGGTTTTGACGAATATCTGCATT 7381 >seq162377 Length=1555 Score = 87.8 bits (96), Expect = 4e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || ||||| || || ||||| |||||||| || || || || | | || Sbjct 113 ACGAAGACGCAGTACAAGATGGAGTGTGGATTCTTTTTGAATATTGTAGTCTGACAATGT 54 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAG 211005 | ||| ||||||||||||||||| || ||||| || |||||||| || |||| Sbjct 53 GCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATGAGACGTTGTTGATCTGGAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1149158141737245