Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq608441 118 2e-21 seq26808 113 1e-19 >seq608441 Length=509 Score = 118 bits (130), Expect = 2e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 151905 AGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTC 151964 ||||| || ||||| |||||||||||||||| ||| || | || ||||| || |||| Sbjct 507 AGAGTCGATTCTTTCTGGATGTTGTAATCGGATAATGTACGTCCGTCTTCAAGTTGTTTC 448 Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024 || ||||| || || | |||||| || | | || || || || |||||||||||| | Sbjct 447 CCAGCGAAAATCAGTCGCTGCTGATCTGGAGGAATGCCCTCTTTGTCTTGAATTTTTGCT 388 Query 152025 TTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGA 152084 || ||| | |||| | | || || || ||||| | || || ||||| || |||||| Sbjct 387 TTTACATTTTCTATGGTATCAGAGGCTTCGACTTCTAATGTTATGGTTTTACCAGTGAGA 328 Query 152085 GTCTTCACGAAGACCTGCAT 152104 || || || || | |||||| Sbjct 327 GTTTTAACAAAAATCTGCAT 308 >seq26808 Length=8541 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| | || | |||||| || || ||||| ||||| || || || | | ||| Sbjct 7602 CTAAGTCTCAAAACTAAATGAAGTGTGGATTCTTTCTGGATATTATAGTCTGAAAGAGTG 7543 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||||| ||| ||||| ||||| || | || ||||| | || || ||| Sbjct 7542 CGGCCATCTTCTAATTGTTTACCGGCAAAGATGAGACGTTGTTGGTCTGGCGGAATACCT 7483 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| ||||||||||| ||||||| | || | |||| ||| || || || | Sbjct 7482 TCCTTGTCTTGAATTTTAGCTTTGACATTTTCGATAGTGTCGGAAGCTTCCACCTCCAAT 7423 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| || || ||||| || || || ||||| | ||||||| Sbjct 7422 GTAATGGTCTTCCCCGTAAGGGTTTTGACGAATATCTGCATT 7381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1143872905732623