Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq601675 145 8e-30 seq562919 86.0 6e-12 >seq601675 Length=487 Score = 145 bits (160), Expect = 8e-30 Identities = 148/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 23772 ATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGC 23831 |||| | || |||||||| || || | ||||||||||||||||| |||||| || || Sbjct 379 ATCTCTGATGTATGTATCTATAAGAAGGGAATACATTTCAGAATGAACATTTTCCATGGC 320 Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTT 23891 ||||| || ||||| |||||||| || |||| || |||||| || | ||||||| | Sbjct 319 TATCTGGAAGCCATAGAAACATCTTGCCTCAGTCACTTGAACTTCTTGTGAAAATCTCTC 260 Query 23892 AGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT 23951 | |||| ||||| || ||||| || || ||| |||||||| |||||||||| || || Sbjct 259 AACTAAGTTTTCATTTACAATGCCGTCGGAAGCCGCAAAGAATGCAAGAACATGCTTGAT 200 Query 23952 AAAATGTCTTTCA 23964 || ||||| ||| Sbjct 199 GAAGTGTCTCTCA 187 >seq562919 Length=404 Score = 86.0 bits (94), Expect = 6e-12 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 |||||||| ||| | |||||| ||||| | ||||||||| | || | ||||| Sbjct 257 TCATCCCTGGAAATAAGCTCATTACTGAATGTGAGTCCTGGCATAAGACCCCTCTTTTTC 198 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||| || || | |||||| || || || || || || || ||||| |||||||| Sbjct 197 AGCCAGAAGATGGAAGCAAAACTGCCCGAGAAAAATATTCCTTCTACAGCTGCAAAGGCA 138 Query 23653 ACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCC 23712 |||| | | ||||||||||||| | | | ||||| | | | ||||| ||| Sbjct 137 ACAATTCTTTCACCAAATGTTGCAGTCTTGCTTGCGATCCACTGTAGAGCCCAATCAGCT 78 Query 23713 TTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAA 23757 ||| |||||||| || |||||||| || || || || ||| Sbjct 77 TTCTTCTTTACACAGGGAAGAGTTTCAATGGCATTAAACAGGAAA 33 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517101549318200