Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq483 86.0 6e-12 >seq483 Length=1310704 Score = 86.0 bits (94), Expect = 6e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 16027 AACTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT 16086 || |||||||||||| ||||| ||||| || ||| |||||| ||||| || || || | Sbjct 173978 AAGTAATCTATCTGCAACAAACTCTATGTACTGAGACATTAGTTCGCAGTTCATACCGAG 173919 Query 16087 AAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAAT 16146 |||| ||| || || || | ||| | ||| | |||||| || || || || ||||| || Sbjct 173918 CAGTCTTACAGGGAGCGCATCTGTGAGAAACTCTTGTTCAATGACTACTGCATCTTTTAT 173859 Query 16147 GATAT 16151 |||| Sbjct 173858 AATAT 173854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511136554949160