Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq741 96.9 2e-15 >seq741 Length=16203812 Score = 96.9 bits (106), Expect = 2e-15 Identities = 156/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 97112 AATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCA 97171 || |||| ||||| || ||||| || | || ||||| ||||| || ||||| || | Sbjct 5508624 AACCAGTTACATGAGCAATCATGTGTGTGAGCAGCGAATAACTAGCTATATTAAATGGAA 5508565 Query 97172 CCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACA 97231 | |||| ||||| ||||| |||||| || ||| || || | || |||||| || Sbjct 5508564 CTCCTAAGCCCATGTCAGCACTTCTTTGGTACAACAAGCAAGATAATTTCCCATCAGCCA 5508505 Query 97232 CATAAAACTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCT-AAGAC 97289 |||| || || || ||| ||||| || || | ||||| || || ||| |||| Sbjct 5508504 CATAGAATTGTGCTAA-ACAGTGACATGGTGGTAGTGCCATCTTCTTAAGGTCTGAAGA- 5508447 Query 97290 ATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTT 97328 |||||| ||||| |||||||||||||| || | ||| || Sbjct 5508446 ATTCCATGCACATATCAACATTCTTCTGTCTGCTGGATT 5508408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346600306672910