Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_002730.1 Length=38297 Score E Sequences producing significant alignments: (Bits) Value seq21284 159 8e-35 >seq21284 Length=642 Score = 159 bits (176), Expect = 8e-35 Identities = 235/328 (72%), Gaps = 6/328 (2%) Strand=Plus/Minus Query 8443 TGCAGTTTCCATTGATTGGCACGAGAGGCCATGCAGGATTAAGTCCCTTGAGGTATTTAT 8502 ||||||| || ||||| || | || ||||| |||||| || || || ||||| || | Sbjct 642 TGCAGTTCCCGTTGATAGGAGTCATAGCCCATGAAGGATTCAGGCCTTTCAGGTACTTCT 583 Query 8503 TTCCGCCGTCGATTATCAGCTTCTTGAATGTTGCTTCGTTAGAGTCAGAAAGTTTTGCTA 8562 ||||| || || | ||| ||||||| |||||||||||| | ||||| ||||| |||| Sbjct 582 GACCGCCATCTATGACCAGTTTCTTGACTGTTGCTTCGTTCGCGTCAGTCAGTTTGGCTA 523 Query 8563 TGACCAAGCTGCCGTTGATCGCCTCCCTTCCGGTATCGA-AAAGAACGAATGTTCCCTCT 8621 || | ||| || || | | ||| | ||| ||||| | | | | ||| || || Sbjct 522 CAACAAGGCTTCCATTCACTGGCTCGCGTCCAGTATCTACTGACACCATATG-ACCTTCA 464 Query 8622 GGAATGCTTAACCCAACCGGTGCCGTCATTGAATCACCTTCCACTTTAAGCCAGAACGCA 8681 || |||||| || || |||| ||||| ||||||||||| || || |||||||| || Sbjct 463 GGGATGCTTTGACCTACAGGTGAGGTCATGGAATCACCTTCAACCTTCAGCCAGAATCCA 404 Query 8682 TTACCTTGAATA--TGCGCGTCAGACTCAAGCCAAACATCTATGTCTTTAATGGTGTATG 8739 || ||| |||| | ||||| ||| ||| |||| ||||| || || ||| | Sbjct 403 TTGCCT--AATAAGTTAACGTCACTGTCATACCATTCATCAATGTCCTTGATATCGTAGG 346 Query 8740 GTTCGCATGCTTCACACCACGAGCCAGC 8767 |||| || |||||||||||||| ||||| Sbjct 345 GTTCACAAGCTTCACACCACGAACCAGC 318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122365611665154